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BaseInfo

ncRNA ID	novel_zma_miR12746
Species	Zea mays
Class	miRNA
Genome position	Chr2:107034624-107034673 [+]
Reference genome	RefGen_v4
Source	SRR1997866
Length	24
Mature sequence(if miRNA)	27 - GUGCUCUCUGCACAAGGGCGGACG - 50
Stem-loop(if miRNA)	--     GA   G    -   -    G   UCCGC  CCU GUGC GAG GCGC G   |||||  ||| |||| ||| ||||   AGGCG  GGA CACG CUC CGUG C GC     --   A    U   U    G
Stem-loop sequence	UCCGCGACCUGGUGCGAGGCGCGGCGGUGCUCUCUGCACAAGGGCGGACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ067064.1	ncRNA:24   GCAGGCGGGAACACGUCUCUCGUG   1   |||||||||*|||||||||=|||| targets:38   CGUCCGCCCCUGUGCAGAGGGCAC   61 Target Full Sequence	2.5	TSA: Zea mays contig02698, mRNA sequence	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   GCAGGCGGGAACACGUCUCUCGUG   1   |||||||||*|||||||||=|||| targets:1350   CGUCCGCCCCUGUGCAGAGGGCAC   1373 Target Full Sequence	2.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   GCAGGCGGGAACACGUCUCUCGUG   1   |||||||||*|||||||||=|||| targets:1350   CGUCCGCCCCUGUGCAGAGGGCAC   1373 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
EU948904.1	ncRNA:24   GCAGGCGGGAACACGUCUCUCGUG   1   |||||||||*||||*||||||||| targets:530   CGUCCGCCCCUGUGAAGAGAGCAC   553 Target Full Sequence	2.5	Zea mays clone 389441 mRNA sequence	NA	coding protein	psRNATarget
EU949034.1	ncRNA:24   GCAGGCGGGAACACGUCUCUCGUG   1   |||||||||*||||*||||||||| targets:531   CGUCCGCCCCUGUGAAGAGAGCAC   554 Target Full Sequence	2.5	Zea mays clone 394358 mRNA sequence	NA	coding protein	psRNATarget