| ncRNA ID | novel_zma_miR12744 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr7:173366669-173366893 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR5451003;SRR1997866 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUCUGGUGCACAUGGAGGAUUGGU - 24 |
| Stem-loop(if miRNA) |
-- CC C UA AUCAUUCA -ACAAAUA C ACUACA AUCUGGUGCACAUGGAGGAUUGGUGCACAUAUUAAAUCA AUCACU AUUUU AUCUAAUGUCUCUAGUUG AUUU ACACCUUCCA C C ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||| | UAGAUUACGUGUACCUUCUAACUACGUGUAUAAUUUAGU UGGUGA UAAAA UAGAUUGCAGAGAUCAAC UAAA UGUGGGAGGU G A UA AU A UC AAACCAUA ACGAUUCC U CACCAC |
| Stem-loop sequence | AUCUGGUGCACAUGGAGGAUUGGUGCACAUAUUAAAUCACCAUCACUCAUUUUUAAUCUAAUGUCUCUAGUUGAUCAUUCAAUUUACAAAUAACACCUUCCACCACUACACACACCACGUUGGAGGGUGUCCUUAGCAAAAUAUACCAAACAACUAGAGACGUUAGAUCUAAAAUAAGUGGUUAUGAUUUAAUAUGUGCAUCAAUCUUCCAUGUGCAUUAGAUAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BT087210.1 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFc0076O09 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| BT041325.1 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFb0204C02 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| BT024146.1 |
|
1.5 | Zea mays clone EL01N0450G02 mRNA sequence | NA | coding protein | psRNATarget |