Search result

BaseInfo

ncRNA ID	novel_zma_miR12732
Species	Zea mays
Class	miRNA
Genome position	Chr1:89710500-89710574 [+]
Reference genome	RefGen_v4
Source	SRR5451003
Length	21
Mature sequence(if miRNA)	1 - AACCGAUGGGAAUAAGCCUUA - 21
Stem-loop(if miRNA)	--                                  U   AACCGAUGGGAAUAAGCCUUAAACCGACGGGAAU A   |||||||||||||||||||||||||||||||||| C   UUGGCUGCCCUUAUUCGGGAUUUGGCUGCCCUUA U UU                                  U
Stem-loop sequence	AACCGAUGGGAAUAAGCCUUAAACCGACGGGAAUUACUUAUUCCCGUCGGUUUAGGGCUUAUUCCCGUCGGUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ106807.1	ncRNA:21   AUUCCGAAUAAGGGUAGCCAA   1   **||||||||||||=|||||| targets:24   CUAGGCUUAUUCCCGUCGGUU   44 Target Full Sequence	1.5	TSA: Zea mays contig42465, mRNA sequence	NA	coding protein	psRNATarget
EU970148.1	ncRNA:21   AUUCCGAAUAAGGGUAGCCAA   1   **||||||||||||=|||||| targets:1034   CCAGGCUUAUUCCCGUCGGUU   1054 Target Full Sequence	1.5	Zea mays clone 340887 cysteine protease 1 precursor, mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157821.1	ncRNA:21   AUUCCGAAUAAGGGUAGCCAA   1   **||||||||||||=|||||| targets:1034   CCAGGCUUAUUCCCGUCGGUU   1054 Target Full Sequence	1.5	Zea mays cysteine protease 1 (LOC100284926), mRNA	NA	coding protein	psRNATarget