ncRNA ID | osa-miRf10870-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UGUCUAAGUUUAGCGCCACA - NA |
Stem-loop(if miRNA) |
         AUC                         G  A    A       CUGAAUACCGUGCCACCGUGGAUGGGAGG CGCCAAAUC   UGGCGCUGAACUUAGACACCUCAGU UC CGUC ACUGGCG                             C |||||||||   ||||||||||||||||||||||||| || |||| ||||||| GCGGUUUAG   ACCGCGAUUUGAAUCUGUGGAGUCG CG AUUU AUCGUAC                             U          CAC                         -  -    -       CACAACUUACACGCAACCGUGCGACUGAA |
Stem-loop sequence | CGCCAAAUCAUCUGGCGCUGAACUUAGACACCUCAGUGUCACGUCAACUGGCGCUGAAUACCGUGCCACCGUGGAUGGGAGGCUAAGUCAGCGUGCCAACGCACAUUCAACACCAUGCUAUUUAGCGCUGAGGUGUCUAAGUUUAGCGCCACACGAUUUGGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK242954.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090088P18, full insert sequence | NA | coding protein | psRNATarget | |||||||||
CT837884.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058P19, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK241139.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065099H13, full insert sequence | NA | coding protein | psRNATarget |