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BaseInfo

ncRNA ID osa-miRf10870-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGUCUAAGUUUAGCGCCACA - NA
Stem-loop(if miRNA)          AUC                         G  A    A       CUGAAUACCGUGCCACCGUGGAUGGGAGG
CGCCAAAUC   UGGCGCUGAACUUAGACACCUCAGU UC CGUC ACUGGCG                             C
|||||||||   ||||||||||||||||||||||||| || |||| |||||||
GCGGUUUAG   ACCGCGAUUUGAAUCUGUGGAGUCG CG AUUU AUCGUAC                             U
         CAC                         -  -    -       CACAACUUACACGCAACCGUGCGACUGAA
Stem-loop sequence CGCCAAAUCAUCUGGCGCUGAACUUAGACACCUCAGUGUCACGUCAACUGGCGCUGAAUACCGUGCCACCGUGGAUGGGAGGCUAAGUCAGCGUGCCAACGCACAUUCAACACCAUGCUAUUUAGCGCUGAGGUGUCUAAGUUUAGCGCCACACGAUUUGGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK242954.1
ncRNA:20   ACACCGCGAUUUGAAUCUGU   1
  |*|||||||=||||||||||
targets:947   UAUGGCGCUGAACUUAGACA   966

2.5 Oryza sativa Japonica Group cDNA, clone: J090088P18, full insert sequence NA coding protein psRNATarget
CT837884.1
ncRNA:20   ACACCGCGAUUUGAAUCUGU   1
  **|||||||=||||||||||
targets:817   CCUGGCGCUGAACUUAGACA   836

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058P19, full insert sequence NA coding protein psRNATarget
AK241139.1
ncRNA:20   ACACCGCGAUUUGAAUCUGU   1
  **|||||||=||||||||||
targets:812   CCUGGCGCUGAACUUAGACA   831

2.5 Oryza sativa Japonica Group cDNA, clone: J065099H13, full insert sequence NA coding protein psRNATarget