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BaseInfo

ncRNA ID novel_zma_miR12721
Species Zea mays
Class miRNA
Genome position Chr6:144628207-144628276 [-]
Reference genome RefGen_v4
Source SRR5451003
Length 24
Mature sequence(if miRNA) 47 - AGCAAUAGCACUCGGCAAAGAUGG - 70
Stem-loop(if miRNA) --A  A  A              U  CUUU   GGU
   GC AU GCACUCGGCAAAGA GG    GCC   U
   || || |||||||||||||| ||    |||
   UG UA CGUGAGCUGUUUCU CC    UGG   C
GAC  G  C              U  --UU   ACC
Stem-loop sequence AGCAAUAGCACUCGGCAAAGAUGGCUUUGCCGGUUCCCAGGUUUCCUUCUUUGUCGAGUGCCAUGGUCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407067.1
ncRNA:24   GGUAGAAACGGCUCACGAUAACGA   1
  =|=|||||||||||||||||*|||
targets:14   UCGUCUUUGCCGAGUGCUAUGGCU   37

1.5 Sequence 5192 from Patent EP2074227 NA coding protein psRNATarget
JB167528.1
ncRNA:24   GGUAGAAACGGCUCACGAUAACGA   1
  =|=|||||||||||||||||*|||
targets:14   UCGUCUUUGCCGAGUGCUAUGGCU   37

1.5 Sequence 5192 from Patent EP2559767 NA coding protein psRNATarget
LQ239197.1
ncRNA:24   GGUAGAAACGGCUCACGAUAACGA   1
  =|=|||||||||||||||||*|||
targets:14   UCGUCUUUGCCGAGUGCUAUGGCU   37

1.5 Sequence 5192 from Patent EP2985353 NA coding protein psRNATarget