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BaseInfo

ncRNA ID	novel_zma_miR12710
Species	Zea mays
Class	miRNA
Genome position	Chr6:99889799-99889854 [+]
Reference genome	RefGen_v4
Source	SRR5451003
Length	23
Mature sequence(if miRNA)	1 - GCGUGGAGCACCAGACUGUCCGG - 23
Stem-loop(if miRNA)	----GC    A     A   U               GUGG GCACC GAC GUCCGGUGG       |||| ||||| ||| ||||||||C       CACC CGUGG CUG CAGGCCACA GCCGAA    -     C   U
Stem-loop sequence	GCGUGGAGCACCAGACUGUCCGGUGGCACACCGGACUGUCCGGUGCCCACAAGCCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU957998.1	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ||||*|||*|||||||||||||= targets:376   CCGGCCAGGCUGGUGCUCCACGU   398 Target Full Sequence	3.0	Zea mays clone 1639792 transferase, transferring glycosyl groups mRNA, complete cds	NA	coding protein	psRNATarget
BT067237.1	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ||||*|||*|||||||||||||= targets:930   CCGGCCAGGCUGGUGCUCCACGU   952 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0337P05 mRNA, complete cds	NA	coding protein	psRNATarget
EU956609.1	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ||||*|||*|||||||||||||= targets:1007   CCGGCCAGGCUGGUGCUCCACGU   1029 Target Full Sequence	3.0	Zea mays clone 1568028 transferase, transferring glycosyl groups mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154325.1	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ||||*|||*|||||||||||||= targets:1007   CCGGCCAGGCUGGUGCUCCACGU   1029 Target Full Sequence	3.0	Zea mays transferase, transferring glycosyl groups (LOC100281407), mRNA	NA	coding protein	psRNATarget
XM_008674601.2	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ||||*|||*|||||||||||||= targets:1568   CCGGCCAGGCUGGUGCUCCACGU   1590 Target Full Sequence	3.0	PREDICTED: Zea mays transferase, transferring glycosyl groups (LOC100281407), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT042459.1	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1112   AGAGACAAUCUGGUGCUCCACGG   1134 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0280K10 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148533.1	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1112   AGAGACAAUCUGGUGCUCCACGG   1134 Target Full Sequence	2.0	Zea mays RING finger protein (LOC100274155), mRNA	NA	coding protein	psRNATarget
NM_001151614.1	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1183   GGAGACAAUCUGGUGCUCCACGG   1205 Target Full Sequence	2.0	Zea mays uncharacterized LOC103650813 (LOC103650813), mRNA	NA	coding protein	psRNATarget
EU972811.1	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1183   GGAGACAAUCUGGUGCUCCACGG   1205 Target Full Sequence	2.0	Zea mays clone 388470 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008676387.2	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1767   GGAGACAAUCUGGUGCUCCACGG   1789 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103650813 (LOC103650813), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008676388.2	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1766   GGAGACAAUCUGGUGCUCCACGG   1788 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103650813 (LOC103650813), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008676385.2	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1778   GGAGACAAUCUGGUGCUCCACGG   1800 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103650813 (LOC103650813), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008676386.2	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1778   GGAGACAAUCUGGUGCUCCACGG   1800 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103650813 (LOC103650813), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008676384.2	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1601   GGAGACAAUCUGGUGCUCCACGG   1623 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103650813 (LOC103650813), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008676383.2	ncRNA:23   GGCCUGUCAGACCACGAGGUGCG   1   ***||||*||||||||||||||* targets:1604   GGAGACAAUCUGGUGCUCCACGG   1626 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103650813 (LOC103650813), transcript variant X1, mRNA	NA	coding protein	psRNATarget