ncRNA ID | novel_zma_miR12709 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:74723347-74723492 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451003 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGUCUUGGCAAGUGGUGCCGGCG - 24 |
Stem-loop(if miRNA) |
--A      G C    - G        -----A    AG  -    --UG       A U    AAUG    -     UC    GGUCUU G AAGU G UGCCGGCG      GGAA  CC CCGA    ACAUCCG G CGGU    UUGG GCAGC  G    |||||| | |||| | ||||||||      ||||  || ||||    ||||||| | ||||    |||| |||||  G    CUAGAG C UUCA C GCGGUCGU      CCUU  GG GGCU    UGUAGGC C GCCA    AGCU CGUCG  U ACC      G -    A G        CGAUCC    AG  A    CUCA       - -    --AA    U     CG |
Stem-loop sequence | AGGUCUUGGCAAGUGGUGCCGGCGAGGAAAGCCCCGAUGACAUCCGAGUCGGUAAUGUUGGGCAGCUCGGUGCGCUGCUUCGAAAACCGCCGGAUGUACUCUCGGAGGGAUUCCCCUAGCUGCUGGCGGCAACUUCGGAGAUCCCA |