ncRNA ID | osa-miRf10867-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UGGAUGAAUCUCGGACGUCU - NA |
Stem-loop(if miRNA) |
                            A      C   CAC  UAAAAU           AGU GAAAAAUGGACGUCCGAGAUUCGUCCAC UCAUCA GAG   AG      UUUUACUUAUG   A |||||||||||||||||||||||||||| |||||| |||   ||      ||||||||||| CUUUUUAUCUGCAGGCUCUAAGUAGGUG AGUAGU CUC   UC      AAAAUGAGUGC   A                             C      A   --A  ---UUU           CUA |
Stem-loop sequence | GAAAAAUGGACGUCCGAGAUUCGUCCACAUCAUCACGAGCACAGUAAAAUUUUUACUUAUGAGUAAAUCCGUGAGUAAAAUUUCUACUCAUGAUGACGUGGAUGAAUCUCGGACGUCUAUUUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015789578.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group protein SRC2 (LOC9270916), mRNA | protein SRC2(LOC9270916) | coding protein | psRNATarget | |||||||||
AK288313.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090021D10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015763997.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group chitinase-like protein 2 (LOC107279727), mRNA | chitinase-like protein 2(LOC107279727) | coding protein | psRNATarget | |||||||||
AK288582.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090049I19, full insert sequence | NA | coding protein | psRNATarget |