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BaseInfo

ncRNA ID osa-miRf10867-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGGAUGAAUCUCGGACGUCU - NA
Stem-loop(if miRNA)                             A      C   CAC  UAAAAU           AGU
GAAAAAUGGACGUCCGAGAUUCGUCCAC UCAUCA GAG   AG      UUUUACUUAUG   A
|||||||||||||||||||||||||||| |||||| |||   ||      |||||||||||
CUUUUUAUCUGCAGGCUCUAAGUAGGUG AGUAGU CUC   UC      AAAAUGAGUGC   A
                            C      A   --A  ---UUU           CUA
Stem-loop sequence GAAAAAUGGACGUCCGAGAUUCGUCCACAUCAUCACGAGCACAGUAAAAUUUUUACUUAUGAGUAAAUCCGUGAGUAAAAUUUCUACUCAUGAUGACGUGGAUGAAUCUCGGACGUCUAUUUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015789578.1
ncRNA:20   UCUGCAGGCUCUAAGUAGGU   1
  =||||||||||||||=||||
targets:1808   GGACGUCCGAGAUUCGUCCA   1827

1.5 PREDICTED: Oryza sativa Japonica Group protein SRC2 (LOC9270916), mRNA protein SRC2(LOC9270916) coding protein psRNATarget
AK288313.1
ncRNA:20   UCUGCAGGCUCUAAGUAGGU   1
  =|||||=|||||||||||||
targets:3561   GGACGUUCGAGAUUCAUCCA   3580

1.0 Oryza sativa Japonica Group cDNA, clone: J090021D10, full insert sequence NA coding protein psRNATarget
XM_015763997.1
ncRNA:20   UCUGCAGGCUCUAAGUAGGU   1
  =|||||=||||||||=||||
targets:836   GGACGUUCGAGAUUCGUCCA   855

2.5 PREDICTED: Oryza sativa Japonica Group chitinase-like protein 2 (LOC107279727), mRNA chitinase-like protein 2(LOC107279727) coding protein psRNATarget
AK288582.1
ncRNA:20   UCUGCAGGCUCUAAGUAGGU   1
  =*||*|||||||||||||||
targets:85   GUACAUCCGAGAUUCAUCCA   104

2.0 Oryza sativa Japonica Group cDNA, clone: J090049I19, full insert sequence NA coding protein psRNATarget