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BaseInfo

ncRNA ID	novel_zma_miR12698
Species	Zea mays
Class	miRNA
Genome position	Chr5:67331012-67331069 [-]
Reference genome	RefGen_v4
Source	SRR5451003;SRR2089708
Length	24
Mature sequence(if miRNA)	1 - AGAGAAGAGAUUAUAGGAGUGCGG - 24
Stem-loop(if miRNA)	--U       UAC    A    -   -        UAUUUUU   AUAA CUCU CUU AUUAU    |||||||   |||| |||| ||| ||||A    GUGAGGA   UAUU GAGA GAG UGAUU GGC       ---    A    A   A
Stem-loop sequence	UUAUUUUUUACAUAAACUCUCUUAUUAUAUUAGUAGAGAAGAGAUUAUAGGAGUGCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
S78780.1	ncRNA:24   GGCGUGAGGAUAUUAGAGAAGAGA   1   ||||||||=||||||||||||||| targets:68   CCGCACUCUUAUAAUCUCUUCUCU   91 Target Full Sequence	1.0	(gamma-zeinA)=opaque2 modifier {5' region} [Zea mays=maize, Tuxpeno CMS 450, mRNA Partial, 1889 nt]	NA	coding protein	psRNATarget
AY109329.1	ncRNA:24   GGCGUGAGGAUAUUAGAGAAGAGA   1   ****||||=||||||||||||||| targets:68   NNNNACUCUUAUAAUCUCUUCUCU   91 Target Full Sequence	1.0	Zea mays CL1979_1 mRNA sequence	NA	coding protein	psRNATarget
XM_008669654.2	ncRNA:24   GGCGUGAGGAUAUUAGAGAAGAGA   1   ||*|=|||||*||*|||||||||| targets:254   CCUCGCUCCUCUAUUCUCUUCUCU   277 Target Full Sequence	2.5	PREDICTED: Zea mays putative AP2/EREBP transcription factor superfamily protein (EREB197), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020547687.1	ncRNA:24   GGCGUGAGGAUAUUAGAGAAGAGA   1   ||*|=|||||*||*|||||||||| targets:255   CCUCGCUCCUCUAUUCUCUUCUCU   278 Target Full Sequence	2.5	PREDICTED: Zea mays putative AP2/EREBP transcription factor superfamily protein (EREB197), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547686.1	ncRNA:24   GGCGUGAGGAUAUUAGAGAAGAGA   1   ||*|=|||||*||*|||||||||| targets:255   CCUCGCUCCUCUAUUCUCUUCUCU   278 Target Full Sequence	2.5	PREDICTED: Zea mays putative AP2/EREBP transcription factor superfamily protein (EREB197), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547685.1	ncRNA:24   GGCGUGAGGAUAUUAGAGAAGAGA   1   ||*|=|||||*||*|||||||||| targets:255   CCUCGCUCCUCUAUUCUCUUCUCU   278 Target Full Sequence	2.5	PREDICTED: Zea mays putative AP2/EREBP transcription factor superfamily protein (EREB197), transcript variant X1, mRNA	NA	coding protein	psRNATarget