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BaseInfo

ncRNA ID novel_zma_miR12661
Species Zea mays
Class miRNA
Genome position Chr4:63543811-63543887 [+]
Reference genome RefGen_v4
Source SRR5451003;SRR5451005
Length 24
Mature sequence(if miRNA) 54 - CUUAAGUUGGAAUAAUUCGGUCGG - 77
Stem-loop(if miRNA) --   -  U      UG      UU   G  UU -   UU
  GAC GA UUAUUC  AUUUAA  GUG CC  G CCU  A
  ||| || ||||||  ||||||  ||| ||  | |||  U
  CUG CU AAUAAG  UGAAUU  CAC GG  C GGG  G
GG   G  U      GU      --   G  UU A   UG
Stem-loop sequence GACGAUUUAUUCUGAUUUAAUUGUGGCCUUGCCUUUAUGGUGGGACUUGGGCACUUAAGUUGGAAUAAUUCGGUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084202.2
ncRNA:24   GGCUGGCUUAAUAAGGUUGAAUUC   1
  |=|*||*|||||||||||||||||
targets:343   CUGCCCAAAUUAUUCCAACUUAAG   366

1.0 Zea mays full-length cDNA clone ZM_BFb0088N15 mRNA, complete cds NA coding protein psRNATarget