ncRNA ID | novel_zma_miR12659 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:13192619-13192816 [-] |
Reference genome | RefGen_v4 |
Source | SRR5451003 |
Length | 24 |
Mature sequence(if miRNA) | 175 - UGGAAAUAACAUUAGCACUGACGG - 198 |
Stem-loop(if miRNA) |
--          A         A  -   U                 C      C      U     AAC           -   --A   ---  AU   GA   UGGAAAUAAC UUAGCACUG CG GGU GCUUAAGAAAACCGUCA UGGAAA AACAUU GCACU   GAUUUUCUUAA UAC   GCC   GC  GUG  A   |||||||||| ||||||||| || ||| ||||||||||||||||| |||||| |||||| |||||   ||||||||||| |||   |||   ||  |||  A   ACUUUUAUUG AAUCGUGAC GC CCA CGAAUUCUUUUGGCGGU ACUUUU UUGUAA CGUGA   CUAAAAGAAUU GUG   CGG   CG  UAC  U AC          C         C  G   -                 C      -      U     CAA           C   GGA   UCA  AU   AA |
Stem-loop sequence | UGGAAAUAACAUUAGCACUGACGGGUUGCUUAAGAAAACCGUCACUGGAAACAACAUUUGCACUAACGAUUUUCUUAAUACAGCCGCAUGUGGAAAUAACAUUAGCACUGGCAGGGUGCUUAAGAAAAUCAACAGUGCUAAUGUUUUUUCACUGGCGGUUUUCUUAAGCACCGCGCCAGUGCUAACGUUAUUUUCACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008667327.2 |
|
3.0 | PREDICTED: Zea mays uncharacterized LOC103644130 (LOC103644130), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020546471.1 |
|
3.0 | PREDICTED: Zea mays uncharacterized LOC109943443 (LOC109943443), mRNA | NA | coding protein | psRNATarget |