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BaseInfo

ncRNA ID novel_zma_miR12659
Species Zea mays
Class miRNA
Genome position Chr4:13192619-13192816 [-]
Reference genome RefGen_v4
Source SRR5451003
Length 24
Mature sequence(if miRNA) 175 - UGGAAAUAACAUUAGCACUGACGG - 198
Stem-loop(if miRNA) --          A         A  -   U                 C      C      U     AAC           -   --A   ---  AU   GA
  UGGAAAUAAC UUAGCACUG CG GGU GCUUAAGAAAACCGUCA UGGAAA AACAUU GCACU   GAUUUUCUUAA UAC   GCC   GC  GUG  A
  |||||||||| ||||||||| || ||| ||||||||||||||||| |||||| |||||| |||||   ||||||||||| |||   |||   ||  |||  A
  ACUUUUAUUG AAUCGUGAC GC CCA CGAAUUCUUUUGGCGGU ACUUUU UUGUAA CGUGA   CUAAAAGAAUU GUG   CGG   CG  UAC  U
AC          C         C  G   -                 C      -      U     CAA           C   GGA   UCA  AU   AA
Stem-loop sequence UGGAAAUAACAUUAGCACUGACGGGUUGCUUAAGAAAACCGUCACUGGAAACAACAUUUGCACUAACGAUUUUCUUAAUACAGCCGCAUGUGGAAAUAACAUUAGCACUGGCAGGGUGCUUAAGAAAAUCAACAGUGCUAAUGUUUUUUCACUGGCGGUUUUCUUAAGCACCGCGCCAGUGCUAACGUUAUUUUCACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008667327.2
ncRNA:24   GGCAGUCACGAUUACAAUAAAGGU   1
  ==||=**|||*|||||||||||||
targets:3693   UUGUUCCUGCAAAUGUUAUUUCCA   3716

3.0 PREDICTED: Zea mays uncharacterized LOC103644130 (LOC103644130), mRNA NA coding protein psRNATarget
XM_020546471.1
ncRNA:24   GGCAGUCACGAUUACAAUAAAGGU   1
  ==||=**|||*|||||||||||||
targets:3934   UUGUUCCUGCAAAUGUUAUUUCCA   3957

3.0 PREDICTED: Zea mays uncharacterized LOC109943443 (LOC109943443), mRNA NA coding protein psRNATarget