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BaseInfo

ncRNA ID	novel_zma_miR12646
Species	Zea mays
Class	miRNA
Genome position	Chr4:116519815-116519975 [-]
Reference genome	RefGen_v4
Source	SRR5451003;SRR5451005;SRR5451006
Length	22
Mature sequence(if miRNA)	1 - CGGAGAAGGUGGCCGCACUGGA - 22
Stem-loop(if miRNA)	UA   ---      ---  UCGCUGACCUCGUGGCGUCGGGGGCCCUUACGGCGGUUGUGUCUGCCGAAGUCGAGAGACUUC   GGC   GGCUGA   CU                                                               G   |||   ||||||   ||                                                               G   GUC   CCGGUG   GA                                                               G AG   ACG      GAA  GGCGGUCGAACGCCGUGAACGACAGCCGCCGGCUGAAAAGGGCCUGCCGCAGUCGUACAACGC
Stem-loop sequence	UAGGCGGCUGACUUCGCUGACCUCGUGGCGUCGGGGGCCCUUACGGCGGUUGUGUCUGCCGAAGUCGAGAGACUUCGGGCGCAACAUGCUGACGCCGUCCGGGAAAAGUCGGCCGCCGACAGCAAGUGCCGCAAGCUGGCGGAGAAGGUGGCCGCACUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001154784.1	ncRNA:22   AGGUCACGCCGGUGGAAGAGGC   1   |=*=|*|=|||||||||||||| targets:813   UUGGGCGUGGCCACCUUCUCCG   834 Target Full Sequence	3.0	Zea mays disulfide oxidoreductase/ monooxygenase/ oxidoreductase (LOC100281864), mRNA	NA	coding protein	psRNATarget
EU958204.1	ncRNA:22   AGGUCACGCCGGUGGAAGAGGC   1   |=*=|*|=|||||||||||||| targets:813   UUGGGCGUGGCCACCUUCUCCG   834 Target Full Sequence	3.0	Zea mays clone 1678310 disulfide oxidoreductase/ monooxygenase/ oxidoreductase mRNA, complete cds	NA	coding protein	psRNATarget
BT055373.1	ncRNA:22   AGGUCACGCCGGUGGAAGAGGC   1   **||||||**|||||||||||| targets:45   AACAGUGCCCCCACCUUCUCCG   66 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0089E18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001111804.1	ncRNA:22   AGGUCACGCCGGUGGAAGAGGC   1   **||||||**|||||||||||| targets:841   AACAGUGCCCCCACCUUCUCCG   862 Target Full Sequence	2.5	Zea mays uncharacterized LOC542190 (LOC542190), mRNA	NA	coding protein	psRNATarget
AY722708.1	ncRNA:22   AGGUCACGCCGGUGGAAGAGGC   1   **||||||**|||||||||||| targets:841   AACAGUGCCCCCACCUUCUCCG   862 Target Full Sequence	2.5	Zea mays clone SPK1 putative salt-inducible protein kinase mRNA, complete cds	NA	coding protein	psRNATarget
BT068875.1	ncRNA:22   AGGUCACGCCGGUGGAAGAGGC   1   **||||||**|||||||||||| targets:1008   AACAGUGCCCCCACCUUCUCCG   1029 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0142K04 mRNA, complete cds	NA	coding protein	psRNATarget
BT088131.1	ncRNA:22   AGGUCACGCCGGUGGAAGAGGC   1   **||||||**|||||||||||| targets:996   AACAGUGCCCCCACCUUCUCCG   1017 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0030A13 mRNA, complete cds	NA	coding protein	psRNATarget