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BaseInfo

ncRNA ID	novel_zma_miR12644
Species	Zea mays
Class	miRNA
Genome position	Chr10:33089259-33089390 [-]
Reference genome	RefGen_v4
Source	SRR5451003
Length	24
Mature sequence(if miRNA)	109 - AGGCAUCGAGCGAAGGAUAGCGUC - 132
Stem-loop(if miRNA)	---AG  A        A  A             U  GCCCCAACAUU    C  CGA  G     UUC         GC UCGAGCGA GG UAGCGUCUUCGCC UC           UGCC UC   GG ACCAG   GACU      || |||||||| || ||||||||||||| ||           |||| ||   || |||||   |||A      UG AGCUCGCU CC GUCGCAGAGGUGG AG           GCGG AG   CC UGGUC   CUGA CUUGG  A        C  -             U  -----AUCACU    A  ---  G     -UA
Stem-loop sequence	AGGCAUCGAGCGAAGGAUAGCGUCUUCGCCUUCGCCCCAACAUUUGCCCUCCGAGGGACCAGUUCGACUAAGUCAUCUGGUGCCGAAGGCGUCACUAGAUGGUGGAGACGCUGCCCUCGCUCGAAGUGGUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU973405.1	ncRNA:24   CUGCGAUAGGAAGCGAGCUACGGA   1   |||||||*|||||||||||||||| targets:394   GACGCUACCCUUCGCUCGAUGCCU   417 Target Full Sequence	1.0	Zea mays clone 398173 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020542326.1	ncRNA:24   CUGCGAUAGGAAGCGAGCUACGGA   1   |||||||*||||*||||||||||| targets:795   GACGCUACCCUUGGCUCGAUGCCU   818 Target Full Sequence	2.5	PREDICTED: Zea mays MADS29 (zmm29), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT054277.1	ncRNA:24   CUGCGAUAGGAAGCGAGCUACGGA   1   |||||||*||||*||||||||||| targets:1235   GACGCUACCCUUGGCUCGAUGCCU   1258 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0210A14 mRNA, complete cds	NA	coding protein	psRNATarget