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BaseInfo

ncRNA ID novel_zma_miR12643
Species Zea mays
Class miRNA
Genome position Chr4:132271494-132271570 [-]
Reference genome RefGen_v4
Source SRR5451003;SRR5451005
Length 24
Mature sequence(if miRNA) 1 - CUUAAGUUGGAAUAAUUCGGUCGG - 24
Stem-loop(if miRNA) --   -GU        U          ---     A   U
  GAC   GUUAUUCC AUUUAAGUGU   GGUCU GCC C
  |||   |||||||| ||||||||||   ||||| ||| U
  CUG   UAAUAAGG UGAAUUCACG   UCAGG CGG A
GG   GCU        U          GAU     A   A
Stem-loop sequence GACGUGUUAUUCCUAUUUAAGUGUGGUCUAGCCUCUAAGGCAGGACUUAGGCACUUAAGUUGGAAUAAUUCGGUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084202.2
ncRNA:24   GGCUGGCUUAAUAAGGUUGAAUUC   1
  |=|*||*|||||||||||||||||
targets:343   CUGCCCAAAUUAUUCCAACUUAAG   366

1.0 Zea mays full-length cDNA clone ZM_BFb0088N15 mRNA, complete cds NA coding protein psRNATarget