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BaseInfo

ncRNA ID osa-miRf10861-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UCCCGGUUGAAUAACCGGGACUA - NA
Stem-loop(if miRNA) U  U              U  C      C    GAUA
 CU UAGUCUCGGUUAUU CA CCGGGA UAAA    G
 || |||||||||||||| || |||||| ||||
 GA AUCAGGGCCAAUAA GU GGCCCU AUUU    C
G  C              -  U      A    AUAG
Stem-loop sequence UCUUUAGUCUCGGUUAUUUCACCCGGGACUAAAGAUAGCGAUAUUUAAUCCCGGUUGAAUAACCGGGACUACAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288224.1
ncRNA:23   AUCAGGGCCAAUAA-GUUGGCCCU   1
  ||||||||||||||-|||||||||
targets:1881   UAGUCCCGGUUAUUUCAACCGGGA   1904

3.0 Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence NA coding protein psRNATarget
AK288438.1
ncRNA:23   AUCAGGGCCAAUAA-GUUGGCCCU   1
  ||||||||||||||-|||||||||
targets:2412   UAGUCCCGGUUAUUUCAACCGGGA   2435

3.0 Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence NA coding protein psRNATarget
AK288424.1
ncRNA:23   AUCAGGGCCAAUAAGUUGGCCCU   1
  |||||||||||||*|||||||||
targets:1282   UAGUCCCGGUUAUACAACCGGGA   1304

1.5 Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence NA coding protein psRNATarget
AK241906.1
ncRNA:23   AUCAGGGCCAAUAAGUUGGCCCU   1
  |||||=|||||*|||||||||||
targets:1661   UAGUCUCGGUUUUUCAACCGGGA   1683

2.5 Oryza sativa Japonica Group cDNA, clone: J075049G22, full insert sequence NA coding protein psRNATarget
AK287459.1
ncRNA:23   AUCAGGGCCAAUAAGUUGGCCCU   1
  ***||||||||||*|||||||||
targets:3334   GUUUCCCGGUUAUACAACCGGGA   3356

1.5 Oryza sativa Japonica Group cDNA, clone: J043019O07, full insert sequence NA coding protein psRNATarget