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BaseInfo

ncRNA ID	novel_zma_miR12636
Species	Zea mays
Class	miRNA
Genome position	Chr4:207662958-207663041 [-]
Reference genome	RefGen_v4
Source	SRR5451003;SRR5451004
Length	21
Mature sequence(if miRNA)	64 - CGGAGGGGAUUGAAGGAGCUA - 84
Stem-loop(if miRNA)	--          U A  GA                   UCAA   CGGAGGGGAU G AG  GCUAAAAUCCCUUCUUUAU    A   |||||||||| | ||  |||||||||||||||||||   GCCUCCUCUA C UC  CGAUUUUAGGGAAGAAAUA    A UU          C C  AC                   UAUU
Stem-loop sequence	CGGAGGGGAUUGAAGGAGCUAAAAUCCCUUCUUUAUUCAAAAUUAUAUAAAGAAGGGAUUUUAGCCACUCCCAUCUCCUCCGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654495.2	ncRNA:21   AUCGAGGAAGUUAGGGGAGGC   1   ||||*|||||||||||||||| targets:1113   UAGCCCCUUCAAUCCCCUCCG   1133 Target Full Sequence	1.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
XM_008654495.2	ncRNA:21   AUCGAGGAAGUUAGGGGAGGC   1   ||||*|=|||||||||||||* targets:1325   UAGCACUUUCAAUCCCCUCCA   1345 Target Full Sequence	3.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
XM_008654031.2	ncRNA:21   AUCGAGGAAGUUAGGGGAGGC   1   |||||||*||||||||||||* targets:1672   UAGCUCCCUCAAUCCCCUCCA   1692 Target Full Sequence	2.0	PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020539411.1	ncRNA:21   AUCGAGGAAGUUAGGGGAGGC   1   ||||*|||*|||||||||||| targets:3500   UAGCCCCUCCAAUCCCCUCCG   3520 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:21   AUCGAGGAAGUUAGGGGAGGC   1   ||||*|||*|||||||||||| targets:3535   UAGCCCCUCCAAUCCCCUCCG   3555 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546477.1	ncRNA:21   AUCGAGGAAGUUAGGGGAGGC   1   ||||*||*||||||||||||* targets:8   UAGCCCCCUCAAUCCCCUCCA   28 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103638694 (LOC103638694), mRNA	NA	coding protein	psRNATarget