ncRNA ID | novel_zma_miR12584 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:76592244-76592463 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451003;SRR5451004;SRR5451006 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGACACAUAAGUUUGACGGCCAC - 24 |
Stem-loop(if miRNA) |
-A   CACA      UG      ACGUGACC  A                          GU           --UGG     AAUU  AC  CC  U           ---A    C   GGA    UAAGUU  ACGGCC        CC UCGAACUUAACCUUAAGAACGUGGGU  CGUCGAACUUA     GAGAA    UG  GG  CC GUCGAACUUAA    AAGG A   |||    ||||||  ||||||        || ||||||||||||||||||||||||||  |||||||||||     |||||    ||  ||  || |||||||||||    |||| C   UCU    AUUCAA  UGCCGG        GG AGCUUGAAUUGGAAUUCUUGCACCCA  GCAGCUUGAAU     UUCUU    AC  CC  GG CAGCUUGAAUU    UUCU G AA   CUUC      GU      --------  C                          UG           UAUAA     --GC  --  AU  -           AUAA    U |
Stem-loop sequence | AGGACACAUAAGUUUGACGGCCACGUGACCCCAUCGAACUUAACCUUAAGAACGUGGGUGUCGUCGAACUUAUGGGAGAAAAUUUGACGGCCCCUGUCGAACUUAAAAAGGCACGUUCUUAAUAUUAAGUUCGACGGUACCCACGUUCUUAAUAUUAAGUUCGACGGUACCCACGUUCUUAAGGUUAAGUUCGACGGGGCCGUUGAACUUACUUCUCUAA |