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BaseInfo

ncRNA ID novel_zma_miR12581
Species Zea mays
Class miRNA
Genome position Chr2:23489942-23489989 [-]
Reference genome RefGen_v4
Source SRR5451003
Length 22
Mature sequence(if miRNA) 27 - AGGUCGGUGAGUGGAGCGGCGA - 48
Stem-loop(if miRNA) AGGUCGGUGA UG    GG        CU
          G  GAGC  CGAAGUGA  G
          |  ||||  ||||||||
          U  CUCG  GCUUCACU  C
---------- GU    --        AG
Stem-loop sequence AGGUCGGUGAGUGGAGCGGCGAAGUGACUGCGAUCACUUCGGCUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020541001.1
ncRNA:22   AGCGGCGAGGUGAGUGGCUGGA   1
  |||||||||||||*||||||||
targets:5028   UCGCCGCUCCACUGACCGACCU   5049

1.5 PREDICTED: Zea mays plasma membrane ATPase 2-like (LOC103632998), transcript variant X36, mRNA NA coding protein psRNATarget