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BaseInfo

ncRNA ID	novel_zma_miR12576
Species	Zea mays
Class	miRNA
Genome position	Chr2:49027426-49027473 [-]
Reference genome	RefGen_v4
Source	SRR5451003
Length	22
Mature sequence(if miRNA)	27 - GGGGCAUCGGACUGUUCGGUGU - 48
Stem-loop(if miRNA)	--  G         --        G   GG GCAUCGGAC  UGUUCGGU U   || |||||||||  ||||||||   CC CGUGGCCUG  ACAAGCCA G AA  G         UG        C
Stem-loop sequence	GGGGCAUCGGACUGUUCGGUGUGCACCGAACAGUGUCCGGUGCGCCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB169812.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   ||||||=||||||||=|||||| targets:36   ACACCGGACAGUCCGGUGCCCC   57 Target Full Sequence	2.5	Sequence 7476 from Patent EP2559767	NA	coding protein	psRNATarget
HI409351.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   ||||||=||||||||=|||||| targets:36   ACACCGGACAGUCCGGUGCCCC   57 Target Full Sequence	2.5	Sequence 7476 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241481.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   ||||||=||||||||=|||||| targets:36   ACACCGGACAGUCCGGUGCCCC   57 Target Full Sequence	2.5	Sequence 7476 from Patent EP2985353	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   ||||||=||||||||=|||||| targets:845   ACACCGGACAGUCCGGUGCCCC   866 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
BT061141.2	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   ||||||=||||||||=|||||| targets:845   ACACCGGACAGUCCGGUGCCCC   866 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061124.2	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   ||||||=||||||||=|||||| targets:453   ACACCGGACAGUCCGGUGCCCC   474 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   ||||||=||||||||=|||||| targets:453   ACACCGGACAGUCCGGUGCCCC   474 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   ||||||=||||||||=|||||| targets:4500   ACACCGGACAGUCCGGUGCCCC   4521 Target Full Sequence	2.5	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   *|||||=||||||||=|||||| targets:4718   CCACCGGACAGUCCGGUGCCCC   4739 Target Full Sequence	2.5	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
HI406592.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   =|||||=||||||=|||||||| targets:10   GCACCGGACAGUCUGAUGCCCC   31 Target Full Sequence	2.5	Sequence 4717 from Patent EP2074227	NA	coding protein	psRNATarget
JB167053.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   =|||||=||||||=|||||||| targets:10   GCACCGGACAGUCUGAUGCCCC   31 Target Full Sequence	2.5	Sequence 4717 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238722.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   =|||||=||||||=|||||||| targets:10   GCACCGGACAGUCUGAUGCCCC   31 Target Full Sequence	2.5	Sequence 4717 from Patent EP2985353	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   =|||||=||||||||=|||||| targets:606   GCACCGGACAGUCCGGUGCCCC   627 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   *|||||=||||||||||||=|| targets:823   CCACCGGACAGUCCGAUGCUCC   844 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
BT065921.2	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   =|||||=||||||||=|||||| targets:606   GCACCGGACAGUCCGGUGCCCC   627 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT065921.2	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   *|||||=||||||||||||=|| targets:823   CCACCGGACAGUCCGAUGCUCC   844 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   *|||||=||||||||=|||||| targets:807   CCACCGGACAGUCCGGUGCCCC   828 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:22   UGUGGCUUGUCAGGCUACGGGG   1   *|||||=||||||||=|||||| targets:807   CCACCGGACAGUCCGGUGCCCC   828 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget