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BaseInfo

ncRNA ID osa-miRf10853-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUCAUCUCAAUCGGGUCUAA - NA
Stem-loop(if miRNA)                        C   --G   -- - A CACAGAUGAGUGUCAUCGGUGACGGGC
GAGGUCAUCUCAAUCGGGUCUAA UUU   AGC  C C U                           U
||||||||||||||||||||||| |||   |||  | | |
CUUCAGUAGAGUUAGCCCGGAUU AAA   GGC  C U C                           A
                       U   AAC   AA A - UACAUGAGCAGCCCCACGUAUAACGAU
Stem-loop sequence GAGGUCAUCUCAAUCGGGUCUAACUUUGAGCCCAUCACAGAUGAGUGUCAUCGGUGACGGGCUAUAGCAAUAUGCACCCCGACGAGUACAUCUACAACGGCAAAAAUUUAGGCCCGAUUGAGAUGACUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288447.1
ncRNA:20   AAUCUGGGCUAACUCUACUG   1
  ||||=|||||||||||||||
targets:642   UUAGGCCCGAUUGAGAUGAC   661

1.0 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget
AK288346.1
ncRNA:20   AAUCUGGGCUAACUCUACUG   1
  ||||=||||||||||||||*
targets:554   UUAGGCCCGAUUGAGAUGAG   573

2.0 Oryza sativa Japonica Group cDNA, clone: J090023M06, full insert sequence NA coding protein psRNATarget
AK119390.1
ncRNA:20   AAUCUGGGCUAACUCUACUG   1
  ||||=||||*||||||||||
targets:3062   UUAGGCCCGUUUGAGAUGAC   3081

2.5 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget
AK068923.1
ncRNA:20   AAUCUGGGCUAACUCUACUG   1
  ||||=||||||||||||*||
targets:1019   UUAGGCCCGAUUGAGAUAAC   1038

2.5 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
AK068923.1
ncRNA:20   AAUCUGGGCUAACUCUACUG   1
  *|||*||||||||||||*||
targets:1105   GUAGUCCCGAUUGAGAUAAC   1124

2.5 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget