ncRNA ID | novel_zma_miR12554 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:162564673-162564890 [-] |
Reference genome | RefGen_v4 |
Source | SRR5105963 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAUGCAGGAAUAGUUUAAGGAC - 24 |
Stem-loop(if miRNA) |
--         -    CC                CG          UGA        G     C   C                       A  UCACCC         A   CCUUAAACU UUCC  GCAUUCUCAUCUGGGU  AUGAACUCUU   GUGAUCAU UGGGU CUU AACUUUUUAAGUGGUUCAUUUUA GU      UUAGGUCCA U   ||||||||| ||||  ||||||||||||||||  ||||||||||   |||||||| ||||| ||| ||||||||||||||||||||||| ||      |||||||||   GGAAUUUGA AAGG  CGUAAGAGUAGAUCCA  UACUUGAGAG   CACUGGUA ACCCA GAA UUGAAAAGUUUACCAAGUAAGGU CA      AGUUCAGGU U CA         U    -A                AG          UUA        G     A   A                       C  CACUUA         A |
Stem-loop sequence | CCUUAAACUUUCCCCGCAUUCUCAUCUGGGUCGAUGAACUCUUUGAGUGAUCAUGUGGGUCCUUCAACUUUUUAAGUGGUUCAUUUUAAGUUCACCCUUAGGUCCAAUUAUGGACUUGAAUUCACACCUGGAAUGAACCAUUUGAAAAGUUAAAGAACCCAGAUGGUCACAUUGAGAGUUCAUGAACCUAGAUGAGAAUGCAGGAAUAGUUUAAGGAC |