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BaseInfo

ncRNA ID novel_zma_miR12544
Species Zea mays
Class miRNA
Genome position Chr5:95405773-95405822 [+]
Reference genome RefGen_v4
Source SRR5105963
Length 24
Mature sequence(if miRNA) 27 - ACGCCUCGCACCAGGCCGCGGACC - 50
Stem-loop(if miRNA) --      -    -   A   A  ACC
  UCCGCG CCUG UGC GAG GC   A
  |||||| |||| ||| ||| ||
  AGGCGC GGAC ACG CUC CG   C
CC      C    C   -   -  CAC
Stem-loop sequence UCCGCGCCUGUGCAGAGAGCACCACCACGCCUCGCACCAGGCCGCGGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU970066.1
ncRNA:24   CCAGGCGCCGGACCACGCUCCGCA   1
  |||||||||||||||*|||||||*
targets:863   GGUCCGCGGCCUGGUACGAGGCGC   886

2.5 Zea mays clone 339328 mRNA sequence NA coding protein psRNATarget
BT085933.2
ncRNA:24   CCAG-----GCGCCGGACCACGCUCCGCA   1
  *|||-----||||||*||*||||||||||
targets:794   CGUCGACUGCGCGGCGUGCUGCGAGGCGU   822

2.5 Zea mays full-length cDNA clone ZM_BFc0086O03 mRNA, complete cds NA coding protein psRNATarget