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BaseInfo

ncRNA ID	novel_zma_miR12538
Species	Zea mays
Class	miRNA
Genome position	Chr4:204558197-204558248 [+]
Reference genome	RefGen_v4
Source	SRR5105963
Length	24
Mature sequence(if miRNA)	29 - AGUACUCGGUAAAGAAGUCUUUGC - 52
Stem-loop(if miRNA)	--     --              CCGA   AAAGA  UCUUUGCCGAGUGC    G   |||||  ||||||||||||||   UUUCU  AGAAAUGGCUCAUG    A CG     GA              AAAA
Stem-loop sequence	AAAGAUCUUUGCCGAGUGCCCGAGAAAAAGUACUCGGUAAAGAAGUCUUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI407253.1	ncRNA:24   CGUUUCUGAAGAAAUGGCUCAUGA   1   ||||||*|||||||=||||||||| targets:26   GCAAAGCCUUCUUUGCCGAGUACU   49 Target Full Sequence	2.5	Sequence 5378 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239383.1	ncRNA:24   CGUUUCUGAAGAAAUGGCUCAUGA   1   ||||||*|||||||=||||||||| targets:26   GCAAAGCCUUCUUUGCCGAGUACU   49 Target Full Sequence	2.5	Sequence 5378 from Patent EP2985353	NA	coding protein	psRNATarget
JB167714.1	ncRNA:24   CGUUUCUGAAGAAAUGGCUCAUGA   1   ||||||*|||||||=||||||||| targets:26   GCAAAGCCUUCUUUGCCGAGUACU   49 Target Full Sequence	2.5	Sequence 5378 from Patent EP2559767	NA	coding protein	psRNATarget
EU957858.1	ncRNA:24   CGUUUCUGAAGAAAUGGCUCAUGA   1   ||||*|=|||*||||||||||||| targets:1233   GCAACGGCUUAUUUACCGAGUACU   1256 Target Full Sequence	2.0	Zea mays clone 1627310 mRNA sequence	NA	coding protein	psRNATarget