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BaseInfo

ncRNA ID	novel_zma_miR12530
Species	Zea mays
Class	miRNA
Genome position	Chr4:114288411-114288498 [-]
Reference genome	RefGen_v4
Source	SRR5105963
Length	24
Mature sequence(if miRNA)	65 - UACCUCGGCGCCGUAGAUCUUGGC - 88
Stem-loop(if miRNA)	--          C                   C     UCCAUC   UACCUCGGCG CGUAGAUCUUGGCGCCGAG UAGGC      A   |||||||||| ||||||||||||||||||| |||||   AUGGAGCCGC GCAUCUAGAACCGUGGCUC AUCCG      A GC          A                   C     CGCUCU
Stem-loop sequence	UACCUCGGCGCCGUAGAUCUUGGCGCCGAGCUAGGCUCCAUCAAUCUCGCGCCUACCUCGGUGCCAAGAUCUACGACGCCGAGGUACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664820.2	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:22   GCCAAGAUCUAUGGCGCCGAGGUA   45 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103641469 (LOC103641469), mRNA	NA	coding protein	psRNATarget
XM_020544295.1	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:67   GCCAAGAUCUAUGGCGCCGAGGUA   90 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103644543 (LOC103644543), mRNA	NA	coding protein	psRNATarget
XM_020548134.1	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:44   GCCAAGAUCUAUGGCGCCGAGGUA   67 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109943956 (LOC109943956), mRNA	NA	coding protein	psRNATarget
XM_020545942.1	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:224   GCCAAGAUCUAUGGCGCCGAGGUA   247 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109943114 (LOC109943114), mRNA	NA	coding protein	psRNATarget
XM_020545943.1	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:224   GCCAAGAUCUAUGGCGCCGAGGUA   247 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109943115 (LOC109943115), mRNA	NA	coding protein	psRNATarget
XM_008666282.2	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:224   GCCAAGAUCUAUGGCGCCGAGGUA   247 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643129 (LOC103643129), mRNA	NA	coding protein	psRNATarget
XM_008652363.2	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:228   GCCAAGAUCUAUGGCGCCGAGGUA   251 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103631452 (LOC103631452), mRNA	NA	coding protein	psRNATarget
XM_020541347.1	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:228   GCCAAGAUCUAUGGCGCCGAGGUA   251 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109940949 (LOC109940949), mRNA	NA	coding protein	psRNATarget
XM_020537732.1	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:293   GCCAAGAUCUAUGGCGCCGAGGUA   316 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109939552 (LOC109939552), mRNA	NA	coding protein	psRNATarget
XM_008654703.2	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   |||||||||||=|||||||||||| targets:1000   GCCAAGAUCUAUGGCGCCGAGGUA   1023 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103633011 (LOC103633011), mRNA	NA	coding protein	psRNATarget
XM_008654031.2	ncRNA:24   CGGUUCUAGAUGCCGCGGCUCCAU   1   ||||*||||||||||||||||*|* targets:2318   GCCAUGAUCUACGGCGCCGAGCUC   2341 Target Full Sequence	2.5	PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666873.2	ncRNA:24   CGGU---UCUAGAUGCCGCGGCUCCAU   1   *||=---=|*||||||||||||||||= targets:763   UCCGCGCGGUUCUACGGCGCCGAGGUG   789 Target Full Sequence	2.0	PREDICTED: Zea mays protein kinase PINOID (LOC103643693), mRNA	NA	coding protein	psRNATarget