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BaseInfo

ncRNA ID	novel_zma_miR12524
Species	Zea mays
Class	miRNA
Genome position	Chr3:31630852-31630905 [-]
Reference genome	RefGen_v4
Source	SRR5105963
Length	24
Mature sequence(if miRNA)	1 - CGUUUAGAGGACACUGCUGGAGGG - 24
Stem-loop(if miRNA)	--A        C           UUAG    UCCAGCAG GUCCUCUAAAU    A    |||||||| |||||||||||    AGGUCGUC CAGGAGAUUUG    G GGG        A           CCAG
Stem-loop sequence	AUCCAGCAGCGUCCUCUAAAUUUAGAGGACCGUUUAGAGGACACUGCUGGAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ094330.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||*||||||||||||| targets:16   CCCUCCAGCAAUGUCCUCUAAACG   39 Target Full Sequence	1.0	TSA: Zea mays contig29982, mRNA sequence	NA	coding protein	psRNATarget
EU975903.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   |||||||||||*|||||||||||| targets:659   CCCUCCAGCAGCGUCCUCUAAACG   682 Target Full Sequence	1.5	Zea mays clone 504920 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
JB166333.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   |||||||||||*|||||||||||* targets:4   CCCUCCAGCAGCGUCCUCUAAACA   27 Target Full Sequence	2.5	Sequence 3997 from Patent EP2559767	NA	coding protein	psRNATarget
HI405872.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   |||||||||||*|||||||||||* targets:4   CCCUCCAGCAGCGUCCUCUAAACA   27 Target Full Sequence	2.5	Sequence 3997 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238002.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   |||||||||||*|||||||||||* targets:4   CCCUCCAGCAGCGUCCUCUAAACA   27 Target Full Sequence	2.5	Sequence 3997 from Patent EP2985353	NA	coding protein	psRNATarget
JB166440.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:8   CCCUCCAGCAACGUCCUCUAAACG   31 Target Full Sequence	2.5	Sequence 4104 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238109.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:8   CCCUCCAGCAACGUCCUCUAAACG   31 Target Full Sequence	2.5	Sequence 4104 from Patent EP2985353	NA	coding protein	psRNATarget
HI405979.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:8   CCCUCCAGCAACGUCCUCUAAACG   31 Target Full Sequence	2.5	Sequence 4104 from Patent EP2074227	NA	coding protein	psRNATarget
HI405852.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:9   CCCUCCAGCAACGUCCUCUAAACG   32 Target Full Sequence	2.5	Sequence 3977 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237982.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:9   CCCUCCAGCAACGUCCUCUAAACG   32 Target Full Sequence	2.5	Sequence 3977 from Patent EP2985353	NA	coding protein	psRNATarget
JB166313.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:9   CCCUCCAGCAACGUCCUCUAAACG   32 Target Full Sequence	2.5	Sequence 3977 from Patent EP2559767	NA	coding protein	psRNATarget
JB166442.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:8   CCCUCCAGCAACGUCCUCUAAACG   31 Target Full Sequence	2.5	Sequence 4106 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238111.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:8   CCCUCCAGCAACGUCCUCUAAACG   31 Target Full Sequence	2.5	Sequence 4106 from Patent EP2985353	NA	coding protein	psRNATarget
HI405981.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:8   CCCUCCAGCAACGUCCUCUAAACG   31 Target Full Sequence	2.5	Sequence 4106 from Patent EP2074227	NA	coding protein	psRNATarget
EU945316.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ||||||||||**|||||||||||| targets:1314   CCCUCCAGCAACGUCCUCUAAACG   1337 Target Full Sequence	2.5	Zea mays clone 257973 mRNA sequence	NA	coding protein	psRNATarget
EZ099679.1	ncRNA:24   GGGAGGUCGUCACAGGAGAUUUGC   1   ***|||||||||||||||||||=* targets:101   GAAUCCAGCAGUGUCCUCUAAAUU   124 Target Full Sequence	2.5	TSA: Zea mays contig35334, mRNA sequence	NA	coding protein	psRNATarget