| ncRNA ID | novel_zma_miR12523 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr3:171064446-171064669 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR5105963 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGCAAGAUGUCGAAGAUAUUUAUG - 24 |
| Stem-loop(if miRNA) |
-- C A A A U C CGCC GUUUGGAUCAUUGG UAAAUAUCU UGACAUCUU CUAAUAAUAGUAUACAAAUAUAUUUU U UAAAACCGAAUUA CUUAAUUGAUAUAUG CUAAAUUAUUAU CC A ||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||| |||||||||||| || A AUUUAUAGA GCUGUAGAA GAUUAUUAUCAUAUGUUUAUAUAAAA G AUUUUGGCUUAAU GAAUUAACUAUAUAC GAUUUAAUGAUA UA U GU A C C C C A ---A AUCUUACCUUAAGU |
| Stem-loop sequence | UAAAUAUCUCUGACAUCUUACUAAUAAUAGUAUACAAAUAUAUUUUAUAUAAAACCGAAUUAUCUUAAUUGAUAUAUGCCUAAAUUAUUAUCGCCCCGUUUGGAUCAUUGGAAUUGAAUUCCAUUCUAAUAAUAGUAAUUUAGACAUAUAUCAAUUAAGCUAAUUCGGUUUUACGCAAAAUAUAUUUGUAUACUAUUAUUAGCAAGAUGUCGAAGAUAUUUAUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008674599.2 |
|
2.5 | PREDICTED: Zea mays GDP-mannose transporter GONST2 (LOC100279720), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| NM_001152679.1 |
|
2.5 | Zea mays GDP-mannose transporter GONST2 (LOC100279720), mRNA | NA | coding protein | psRNATarget | |||||||||
| BT054756.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0027O04 mRNA, complete cds | NA | coding protein | psRNATarget |