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BaseInfo

ncRNA ID	novel_zma_miR12522
Species	Zea mays
Class	miRNA
Genome position	Chr3:211469484-211469573 [-]
Reference genome	RefGen_v4
Source	SRR5105963;SRR2089702
Length	22
Mature sequence(if miRNA)	69 - UUGGAUUAUGGUGAAAGGGUAG - 90
Stem-loop(if miRNA)	--                                          G   UUGGAUUAUGGUGAAAGGGUAGGAGGGUAAAAUAUCACUUUG A   ||||||||||||||||||||||||||||||||||||||||||   AACCUAAUACCACUUUCCCAUCCUCCCAUUUUAUAGUGAAAC C UC                                          C
Stem-loop sequence	UUGGAUUAUGGUGAAAGGGUAGGAGGGUAAAAUAUCACUUUGGACCCAAAGUGAUAUUUUACCCUCCUACCCUUUCACCAUAAUCCAACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975471.1	ncRNA:22   GAUGGGAAAGUGGUAUUAGGUU   1   ||||=||||||||||||||||| targets:803   CUACUCUUUCACCAUAAUCCAA   824 Target Full Sequence	1.0	Zea mays clone 490696 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001139196.1	ncRNA:22   GAUGGGAAAGUGGUAUUAGGUU   1   ||||||||*||||||||||||| targets:1070   CUACCCUUACACCAUAAUCCAA   1091 Target Full Sequence	1.0	Zea mays OSJNBa0029H02.27-like protein (pco137821), mRNA	NA	coding protein	psRNATarget
BT036602.1	ncRNA:22   GAUGGGAAAGUGGUAUUAGGUU   1   ||||||||*||||||||||||| targets:1070   CUACCCUUACACCAUAAUCCAA   1091 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0125H01 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008645727.2	ncRNA:22   GAUGGGAAAGUGGUAUUAGGUU   1   |||*|*|||||||||||||||= targets:3867   CUAACAUUUCACCAUAAUCCAG   3888 Target Full Sequence	3.0	PREDICTED: Zea mays Translocase of chloroplast 159 chloroplastic (LOC100381654), transcript variant X1, mRNA	NA	coding protein	psRNATarget