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BaseInfo

ncRNA ID osa-miRf10849-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UGGACUGUUUGGGGGAGCUUCU - NA
Stem-loop(if miRNA) GC   -A      G            A  U   GAG
  UGG  CUGUUU GGGGAGCUUCUG UU UGG   A
  |||  |||||| |||||||||||| || |||   A
  ACC  GACAAA CCCCUCGAAGAU GA AUC   A
CA   CG      G            C  U   GGC
Stem-loop sequence GCUGGACUGUUUGGGGGAGCUUCUGAUUUUGGGAGAAACGGCUAUAGCUAGAAGCUCCCCGAAACAGGCCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK064146.1
ncRNA:22   UCUUCGAGGGGGUUUGUCAGGU   1
  ||||*||||||||||||||=||
targets:1142   AGAAACUCCCCCAAACAGUUCA   1163

2.5 Oryza sativa Japonica Group cDNA clone:002-103-C06, full insert sequence NA coding protein psRNATarget
AK067885.1
ncRNA:22   UCUUCGAGGGGGUUUGUCAGGU   1
  |||||||*||=|||||||||||
targets:1161   AGAAGCUGCCUCAAACAGUCCA   1182

2.5 Oryza sativa Japonica Group cDNA clone:J013123F22, full insert sequence NA coding protein psRNATarget
XM_015768499.1
ncRNA:22   UCUUCGAGGGGGUUUGUCAGGU   1
  ||||||*||||*||||||||||
targets:1311   AGAAGCCCCCCAAAACAGUCCA   1332

2.5 PREDICTED: Oryza sativa Japonica Group calcineurin B-like protein 8 (LOC107276173), transcript variant X2, mRNA calcineurin B-like protein 8(LOC107276173) coding protein psRNATarget
XM_015768498.1
ncRNA:22   UCUUCGAGGGGGUUUGUCAGGU   1
  ||||||*||||*||||||||||
targets:1344   AGAAGCCCCCCAAAACAGUCCA   1365

2.5 PREDICTED: Oryza sativa Japonica Group calcineurin B-like protein 8 (LOC107276173), transcript variant X1, mRNA calcineurin B-like protein 8(LOC107276173) coding protein psRNATarget
AK288737.1
ncRNA:22   UCUUCGAGGGGGUUUGUCAGGU   1
  **||||||||||||||||*||*
targets:1238   UAAAGCUCCCCCAAACAGACCC   1259

2.5 Oryza sativa Japonica Group cDNA, clone: J090063M20, full insert sequence NA coding protein psRNATarget