ncRNA ID | novel_zma_miR12503 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:163050277-163050452 [-] |
Reference genome | RefGen_v4 |
Source | SRR1997865 |
Length | 24 |
Mature sequence(if miRNA) | 153 - UCCACUGACGGUUAUCUUAACACA - 176 |
Stem-loop(if miRNA) |
--       A                                                    AUCU    -                 U   UCCACUG CGGUUAUCUUAACACAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUU    UAAC UUAACCGCCAGUGGAAA C   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| |||||||||||||||||   AGGUGAC GCCAAUAGAAUUGUGUUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAA    AUUG GGUUGGCGGUCACUUUU A AA       C                                                    -CAC    U                 A |
Stem-loop sequence | UCCACUGACGGUUAUCUUAACACAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUAUCUUAACUUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGGAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT033892.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0124I12 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001137136.2 |
|
2.5 | Zea mays hypothetical protein (LOC100191707), mRNA | NA | coding protein | psRNATarget |