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BaseInfo

ncRNA ID novel_zma_miR12500
Species Zea mays
Class miRNA
Genome position Chr1:227431919-227431981 [-]
Reference genome RefGen_v4
Source SRR5105963
Length 23
Mature sequence(if miRNA) 1 - GCCGGGGCCAGAUCUCAGAAGCA - 23
Stem-loop(if miRNA) --       CU         U   C  CUCC
  CUUCUGA  UCUGGCCCC GCU AG    A
  |||||||  ||||||||| ||| ||    C
  GAAGACU  AGACCGGGG CGA UC    C
AC       CU         C   A  ACAA
Stem-loop sequence CUUCUGACUUCUGGCCCCUGCUCAGCUCCACCAACACUAAGCCGGGGCCAGAUCUCAGAAGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ516772.1
ncRNA:23   ACGAAGACUCUAGACCGGGGCCG   1
  |||||||||||||||||||||||
targets:73   UGCUUCUGAGAUCUGGCCCCGGC   95

0.0 TSA: Zea mays cultivar W22 CL164Contig1.betc, mRNA sequence NA coding protein psRNATarget