ncRNA ID | novel_zma_miR12489 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:133027434-133027615 [+] |
Reference genome | RefGen_v4 |
Source | SRR5105961 |
Length | 25 |
Mature sequence(if miRNA) | 158 - CUGUCACGUAGGAAAAGUUGGCGCC - 182 |
Stem-loop(if miRNA) |
--                                                                              G  UAGCAC   AC   CGCCAACUUUUCCUACGUGGCAGCCGAUGUGGCAAGUCCCAGGGGGUCGGCGCCAUAGAUCUUGGCGCCGACCCCCCU GA      CGG  C   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      |||   GCGGUUGAAAAGGAUGCACUGUCGGCUACACCGUUCAGGGUCCCCCAGCCGCGGUAUCUAGAACCGCGGCUGGGGGGA CU      GCC  C CC                                                                              A  ------   AC |
Stem-loop sequence | CGCCAACUUUUCCUACGUGGCAGCCGAUGUGGCAAGUCCCAGGGGGUCGGCGCCAUAGAUCUUGGCGCCGACCCCCCUGGAUAGCACCGGACCCCACCGUCAAGGGGGGUCGGCGCCAAGAUCUAUGGCGCCGACCCCCUGGGACUUGCCACAUCGGCUGUCACGUAGGAAAAGUUGGCGCC |