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BaseInfo

ncRNA ID	novel_zma_miR12485
Species	Zea mays
Class	miRNA
Genome position	Chr3:93356514-93356657 [+]
Reference genome	RefGen_v4
Source	SRR5105961
Length	23
Mature sequence(if miRNA)	122 - UCUCGGAUUGGAGUAGAGCAUGG - 144
Stem-loop(if miRNA)	--           UG          U          U                  CAAACA  -    UC   CA   AUGCUCUACUC  GUCCGAGACA AGUUUCGGUG CACCUCCCUGUUGUUCUC      GA ACAC  UCC  U   |||||||||||  |||||||||| |||||||||| ||||||||||||||||||      || ||||  |||   UACGAGAUGAG  UAGGCUCUGU UCAAAGUCGU GUGGAGGGACAACAAGAG      CU UGUG  AGG  C GG           GU          C          C                  ----AC  A    -C   AC
Stem-loop sequence	AUGCUCUACUCUGGUCCGAGACAUAGUUUCGGUGUCACCUCCCUGUUGUUCUCCAAACAGAACACUCUCCCAUCCAGGACGUGUAUCCAGAGAACAACAGGGAGGUGCUGCUGAAACUCUGUCUCGGAUUGGAGUAGAGCAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT084814.1	ncRNA:23   GGUACGAGAUGAGGUUAGGCUCU   1   ||-||||=|=||||||||||||* targets:159   CC-UGCUUUGCUCCAAUCCGAGC   180 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0186D16 mRNA, complete cds	NA	coding protein	psRNATarget
BT085839.1	ncRNA:23   GGUACGAGAUGAGGUUAGGCUCU   1   ||-||||=|=||||||||||||* targets:184   CC-UGCUUUGCUCCAAUCCGAGC   205 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0071D17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001323345.1	ncRNA:23   GGUACGAGAUGAGGUUAGGCUCU   1   ||-||||=|=||||||||||||* targets:184   CC-UGCUUUGCUCCAAUCCGAGC   205 Target Full Sequence	3.0	Zea mays hypothetical protein (LOC100501637), mRNA	NA	coding protein	psRNATarget