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BaseInfo

ncRNA ID novel_zma_miR12484
Species Zea mays
Class miRNA
Genome position Chr3:54583294-54583385 [+]
Reference genome RefGen_v4
Source SRR5105961
Length 24
Mature sequence(if miRNA) 69 - AUUCCCGUCGGCCAGAGCAAAGGC - 92
Stem-loop(if miRNA) --  G   CAG              AAC     G AC        G
  CU UGC   GGCCGACGGGAGUU   UUAAU C  GUCGGCUG U
  || |||   ||||||||||||||   ||||| |  |||||||| A
  GA ACG   CCGGCUGCCCUUAA   AAUUG G  CGGCCGAU G
CG  A   AGA              -GU     A GA        G
Stem-loop sequence CUGUGCCAGGGCCGACGGGAGUUAACUUAAUGCACGUCGGCUGGUAGGUAGCCGGCAGGAGUUAAUGAAUUCCCGUCGGCCAGAGCAAAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008682560.2
ncRNA:24   CGGAAACGAGACCGGCUGCCCUUA   1
  ||||*||||||||||||||||=||
targets:25   GCCUAUGCUCUGGCCGACGGGGAU   48

1.5 PREDICTED: Zea mays submaxillary gland androgen-regulated protein 3A-like (LOC103655885), mRNA NA coding protein psRNATarget
XM_020549056.1
ncRNA:20   AACGAGACCGGCUGCCCUUA   1
  *|||||||||||||||||=|
targets:1   AUGCUCUGGCCGACGGGAGU   20

1.5 PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC109944332), mRNA NA coding protein psRNATarget
XM_008682440.1
ncRNA:20   AACGAGACCGGCUGCCCUUA   1
  *|||||||||||||||||=|
targets:1   AUGCUCUGGCCGACGGGAGU   20

1.5 PREDICTED: Zea mays transcriptional regulatory protein AlgP-like (LOC103655736), mRNA NA coding protein psRNATarget
XM_020550822.1
ncRNA:20   AACGAGACCGGCUGCCCUUA   1
  *|||||||||||||||||=|
targets:1   AUGCUCUGGCCGACGGGAGU   20

1.5 PREDICTED: Zea mays transcriptional regulatory protein AlgP-like (LOC109945041), mRNA NA coding protein psRNATarget
XM_008677949.1
ncRNA:20   AACGAGACCGGCUGCCCUUA   1
  *|||||||||||||||||=|
targets:1   AUGCUCUGGCCGACGGGAGU   20

1.5 PREDICTED: Zea mays lysine-rich arabinogalactan protein 19-like (LOC103652341), mRNA NA coding protein psRNATarget
XM_008668451.2
ncRNA:20   AACGAGACCGGCUGCCCUUA   1
  *|||||||||||||||||=|
targets:1   AUGCUCUGGCCGACGGGAGU   20

1.5 PREDICTED: Zea mays basic proline-rich protein-like (LOC103645392), mRNA NA coding protein psRNATarget