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BaseInfo

ncRNA ID	novel_zma_miR12480
Species	Zea mays
Class	miRNA
Genome position	Chr3:37689348-37689399 [+]
Reference genome	RefGen_v4
Source	SRR5105961
Length	24
Mature sequence(if miRNA)	29 - AGCCGGACCGUCCGCAUGAGCACC - 52
Stem-loop(if miRNA)	--G  -    GA     U             GC CAUG  CGGAC GUCCGGCUGA    || ||||  ||||| |||||||||G    CG GUAC  GCCUG CAGGCCGACU CCA  A    --     C
Stem-loop sequence	GGCCAUGGACGGACUGUCCGGCUGAGUCAGCCGGACCGUCCGCAUGAGCACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT037979.1	ncRNA:24   CCA-------CGAGUACGCCUGCCAGGCCGA   1   |||-------||||**||||||||||||||* targets:833   GGUCCGGAGAGCUCCGGCGGACGGUCCGGCC   863 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0205G18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   CCACGAGUACGCCUGCCAGGCCGA   1   **||**|=|||||||||||||||* targets:714   AAUGACCGUGCGGACGGUCCGGCC   737 Target Full Sequence	3.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   CCACGAGUACGCCUGCCAGGCCGA   1   **||**|=|||||||||||||||* targets:714   AAUGACCGUGCGGACGGUCCGGCC   737 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020549925.1	ncRNA:24   CCA-------CGAGUACGCCUGCCAGGCCGA   1   |||-------||||**||||||||||||||* targets:940   GGUCCGGAGAGCUCCGGCGGACGGUCCGGCC   970 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100383960 (si606063b12(728)), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020549924.1	ncRNA:24   CCA-------CGAGUACGCCUGCCAGGCCGA   1   |||-------||||**||||||||||||||* targets:939   GGUCCGGAGAGCUCCGGCGGACGGUCCGGCC   969 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100383960 (si606063b12(728)), transcript variant X1, mRNA	NA	coding protein	psRNATarget