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BaseInfo

ncRNA ID	novel_zma_miR12477
Species	Zea mays
Class	miRNA
Genome position	Chr3:179107758-179107867 [-]
Reference genome	RefGen_v4
Source	SRR5105961
Length	21
Mature sequence(if miRNA)	1 - AGUGGUGCUGAACUAGGGGCA - 21
Stem-loop(if miRNA)	--                  C          AA C    CU           AUG   CCCUUAGUUCAGCAUCAC GUUCAGUUUU  C UUCU  GGUAGUAAGGG   G   |||||||||||||||||| ||||||||||  | ||||  |||||||||||   GGGGAUCAAGUCGUGGUG CGAGUCAAAA  G GAGA  UCAUCAUUUUU   G AC                  A          CG U    AG           GCA
Stem-loop sequence	CCCUUAGUUCAGCAUCACCGUUCAGUUUUAACCUUCUCUGGUAGUAAGGGAUGGGACGUUUUUACUACUGAAGAGUGGCAAAACUGAGCAGUGGUGCUGAACUAGGGGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU944656.1	ncRNA:21   ACGGGGAUCAAGUCGUGGUGA   1   ||=||||||||=||||||||| targets:815   UGUCCCUAGUUUAGCACCACU   835 Target Full Sequence	2.5	Zea mays clone 225302 mRNA sequence	NA	coding protein	psRNATarget
EU975665.1	ncRNA:21   ACGGGGAUCAAGUCGUGGUGA   1   ||=||||||||=||||||||| targets:2139   UGUCCCUAGUUUAGCACCACU   2159 Target Full Sequence	2.5	Zea mays clone 496098 mRNA sequence	NA	coding protein	psRNATarget
XM_008680748.2	ncRNA:21   ACGGGGAUCAAGUCGUGGUGA   1   ||=||||||||=||||||||| targets:2249   UGUCCCUAGUUUAGCACCACU   2269 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 21 (LOC103653937), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008680747.2	ncRNA:21   ACGGGGAUCAAGUCGUGGUGA   1   ||=||||||||=||||||||| targets:2341   UGUCCCUAGUUUAGCACCACU   2361 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 21 (LOC103653937), transcript variant X1, mRNA	NA	coding protein	psRNATarget