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BaseInfo

ncRNA ID	novel_zma_miR12472
Species	Zea mays
Class	miRNA
Genome position	Chr1:195809904-195809984 [-]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	58 - UCUAGUGACGGUUUUCUUAAGAAA - 81
Stem-loop(if miRNA)	--             UU        --      UG      U   UCUAGUGACGGUU  CUUAAGAA  ACCGUC  UAGAAA C   |||||||||||||  ||||||||  ||||||  ||||||   AGAUCACUGCCAA  GAAUUCUU  UGGCGG  AUCUUU G AA             -U        UU      UG      A
Stem-loop sequence	UCUAGUGACGGUUUUCUUAAGAAACCGUCUGUAGAAAUCGAUUUCUAGUGGCGGUUUUUCUUAAGUAACCGUCACUAGAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163445.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||*||||||||||||||||||||| targets:6   UUCCUUAAGAAAACCGUCACUAGA   29 Target Full Sequence	0.0	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget
HI402984.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||*||||||||||||||||||||| targets:6   UUCCUUAAGAAAACCGUCACUAGA   29 Target Full Sequence	0.0	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235114.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||*||||||||||||||||||||| targets:6   UUCCUUAAGAAAACCGUCACUAGA   29 Target Full Sequence	0.0	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget
HI403059.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||||||||||||||||*||||||| targets:6   UUUCUUAAGAAAACCGCCACUAGA   29 Target Full Sequence	1.5	Sequence 1184 from Patent EP2074227	NA	coding protein	psRNATarget
JB163520.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||||||||||||||||*||||||| targets:6   UUUCUUAAGAAAACCGCCACUAGA   29 Target Full Sequence	1.5	Sequence 1184 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235189.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||||||||||||||||*||||||| targets:6   UUUCUUAAGAAAACCGCCACUAGA   29 Target Full Sequence	1.5	Sequence 1184 from Patent EP2985353	NA	coding protein	psRNATarget
EU943186.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||||||||||||||||||||*||| targets:1937   UUUCUUAAGAAAACCGUCACAAGA   1960 Target Full Sequence	1.5	Zea mays clone 1582065 mRNA sequence	NA	coding protein	psRNATarget
JB166343.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   |||*||||||||||||*||||||| targets:28   UUUAUUAAGAAAACCGCCACUAGA   51 Target Full Sequence	1.5	Sequence 4007 from Patent EP2559767	NA	coding protein	psRNATarget
HI405882.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   |||*||||||||||||*||||||| targets:28   UUUAUUAAGAAAACCGCCACUAGA   51 Target Full Sequence	1.5	Sequence 4007 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238012.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   |||*||||||||||||*||||||| targets:28   UUUAUUAAGAAAACCGCCACUAGA   51 Target Full Sequence	1.5	Sequence 4007 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235227.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||*|||||||||||||*||||||| targets:67   UUCCUUAAGAAAACCGCCACUAGA   90 Target Full Sequence	1.5	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget
JB163558.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||*|||||||||||||*||||||| targets:67   UUCCUUAAGAAAACCGCCACUAGA   90 Target Full Sequence	1.5	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget
HI403097.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||*|||||||||||||*||||||| targets:67   UUCCUUAAGAAAACCGCCACUAGA   90 Target Full Sequence	1.5	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget
HI402986.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   |||*||||||||||||*||||||| targets:6   UUUAUUAAGAAAACCGCCACUAGA   29 Target Full Sequence	1.5	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget
JB163447.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   |||*||||||||||||*||||||| targets:6   UUUAUUAAGAAAACCGCCACUAGA   29 Target Full Sequence	1.5	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235215.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||*|||||||||||||*||||||| targets:6   UUCCUUAAGAAAACCGCCACUAGA   29 Target Full Sequence	1.5	Sequence 1210 from Patent EP2985353	NA	coding protein	psRNATarget
JB163546.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||*|||||||||||||*||||||| targets:6   UUCCUUAAGAAAACCGCCACUAGA   29 Target Full Sequence	1.5	Sequence 1210 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   |||*||||||||||||*||||||| targets:6   UUUAUUAAGAAAACCGCCACUAGA   29 Target Full Sequence	1.5	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
HI403085.1	ncRNA:24   AAAGAAUUCUUUUGGCAGUGAUCU   1   ||*|||||||||||||*||||||| targets:6   UUCCUUAAGAAAACCGCCACUAGA   29 Target Full Sequence	1.5	Sequence 1210 from Patent EP2074227	NA	coding protein	psRNATarget