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BaseInfo

ncRNA ID novel_zma_miR12467
Species Zea mays
Class miRNA
Genome position Chr1:202267743-202267853 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - AUCGAAAUCGGUAUCGGAAUCGGC - 24
Stem-loop(if miRNA) ---U     A  A           --AAUUUUUCA    GAU  AUUGAUAACGGUAUU
    AUUCC GA AUCGAUUUCGA           ACCG   UC               U
    ||||| || |||||||||||           ||||   ||
    UAAGG CU UGGCUAAAGCU           CUUU   UG               U
CGGC     -  A           AUCUUUUAAAA    ---  GCUAAGGCAAAAGCU
Stem-loop sequence UAUUCCAGAAAUCGAUUUCGAAAUUUUUCAACCGGAUUCAUUGAUAACGGUAUUUUUCGAAAACGGAAUCGGUUUUCAAAAUUUUCUAUCGAAAUCGGUAUCGGAAUCGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940733.1
ncRNA:24   CGGCUAAGGCUAU-GGCUAAAGCUA   1
  ****|||||||||-|||||||||||
targets:194   UAAAAUUCCGAUAACCGAUUUCGAU   218

3.0 Zea mays clone 1061280 mRNA sequence NA coding protein psRNATarget