ncRNA ID | novel_zma_miR12453 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:209035878-209035943 [-] |
Reference genome | RefGen_v4 |
Source | SRR1997865;SRR1997866;SRR2089708 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGAAAAAGGUGGGUGCGUUUGU - 22 |
Stem-loop(if miRNA) |
AAACUUAUCUAGCUCUUC   AAA      A      A                   CAU   CACUUU UUCAUG G                   |||   |||||| |||||| G                   GUG   GUGGAA AAGUAC U -----------UGUUUGC   --G      A      U |
Stem-loop sequence | AAACUUAUCUAGCUCUUCCAUAAACACUUUAUUCAUGAGGUUCAUGAAAAAGGUGGGUGCGUUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LQ241488.1 |
|
1.5 | Sequence 7483 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB169819.1 |
|
1.5 | Sequence 7483 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
HI409358.1 |
|
1.5 | Sequence 7483 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
XM_008682725.2 |
|
3.0 | PREDICTED: Zea mays Nucleotide/sugar transporter family protein (LOC100191213), transcript variant X2, mRNA | NA | coding protein | psRNATarget |