ncRNA ID | novel_zma_miR12452 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:218601848-218601949 [-] |
Reference genome | RefGen_v4 |
Source | SRR5105961 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AUCCUCUCGGGUCCUAGCUC - 20 |
Stem-loop(if miRNA) |
--  A    UA  G         A   UCAC        C   AA      A   GC AGGA  CC GAGAGGAUU AAG    UAAAAUUU CUU  UAUUCA U   || ||||  || ||||||||| |||    |||||||| |||  ||||||   CG UCCU  GG CUCUCCUAA UUC    AUUUUAAA GAA  AUAAGU A CU  A    --  G         C   CCCA        A   CA      U |
Stem-loop sequence | GCAAGGAUACCGGAGAGGAUUAAAGUCACUAAAAUUUCCUUAAUAUUCAAUAUUGAAUAACAAGAAAAUUUUAACCCCUUCAAUCCUCUCGGGUCCUAGCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY110186.1 |
|
0.0 | Zea mays CL142_1 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU949300.1 |
|
0.0 | Zea mays clone 400899 mRNA sequence | NA | coding protein | psRNATarget |