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BaseInfo

ncRNA ID novel_zma_miR12452
Species Zea mays
Class miRNA
Genome position Chr2:218601848-218601949 [-]
Reference genome RefGen_v4
Source SRR5105961
Length 20
Mature sequence(if miRNA) 1 - AUCCUCUCGGGUCCUAGCUC - 20
Stem-loop(if miRNA) --  A    UA  G         A   UCAC        C   AA      A
  GC AGGA  CC GAGAGGAUU AAG    UAAAAUUU CUU  UAUUCA U
  || ||||  || ||||||||| |||    |||||||| |||  ||||||
  CG UCCU  GG CUCUCCUAA UUC    AUUUUAAA GAA  AUAAGU A
CU  A    --  G         C   CCCA        A   CA      U
Stem-loop sequence GCAAGGAUACCGGAGAGGAUUAAAGUCACUAAAAUUUCCUUAAUAUUCAAUAUUGAAUAACAAGAAAAUUUUAACCCCUUCAAUCCUCUCGGGUCCUAGCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110186.1
ncRNA:20   CUCGAUCCUGGGCUCUCCUA   1
  ||||||||||||||||||||
targets:866   GAGCUAGGACCCGAGAGGAU   885

0.0 Zea mays CL142_1 mRNA sequence NA coding protein psRNATarget
EU949300.1
ncRNA:20   CUCGAUCCUGGGCUCUCCUA   1
  ||||||||||||||||||||
targets:866   GAGCUAGGACCCGAGAGGAU   885

0.0 Zea mays clone 400899 mRNA sequence NA coding protein psRNATarget