ncRNA ID | novel_zma_miR12451 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:225650208-225650286 [-] |
Reference genome | RefGen_v4 |
Source | SRR5105961 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAUAUGGUCGUGAACUUGCCA - 21 |
Stem-loop(if miRNA) |
GCA     -       -C   ---     AG  GA  ---- G    CAAGU UACGACC  AUU   UCAGG  GG  CU    G A    ||||| |||||||  |||   |||||  ||  ||    |    GUUCA GUGCUGG  UAA   AGUCC  CC  GA    C A ACC     A       UA   AUC     AA  AC  GAAU A |
Stem-loop sequence | GCACAAGUUACGACCCAUUUCAGGAGGGGACUGGAAACUAAGAGCACCAACCUGACUAAAUAUGGUCGUGAACUUGCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001175015.1 |
|
2.5 | Zea mays uncharacterized LOC100382263 (LOC100382263), mRNA | NA | coding protein | psRNATarget | |||||||||
BT063684.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0094N19 mRNA, complete cds | NA | coding protein | psRNATarget |