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BaseInfo

ncRNA ID novel_zma_miR12451
Species Zea mays
Class miRNA
Genome position Chr2:225650208-225650286 [-]
Reference genome RefGen_v4
Source SRR5105961
Length 21
Mature sequence(if miRNA) 1 - AAUAUGGUCGUGAACUUGCCA - 21
Stem-loop(if miRNA) GCA     -       -C   ---     AG  GA  ---- G
   CAAGU UACGACC  AUU   UCAGG  GG  CU    G A
   ||||| |||||||  |||   |||||  ||  ||    |
   GUUCA GUGCUGG  UAA   AGUCC  CC  GA    C A
ACC     A       UA   AUC     AA  AC  GAAU A
Stem-loop sequence GCACAAGUUACGACCCAUUUCAGGAGGGGACUGGAAACUAAGAGCACCAACCUGACUAAAUAUGGUCGUGAACUUGCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001175015.1
ncRNA:21   ACCGUUCAAGUGCUGGUAUAA   1
  ||*|||||||||||||||=||
targets:1301   UGCCAAGUUCACGACCAUGUU   1321

2.5 Zea mays uncharacterized LOC100382263 (LOC100382263), mRNA NA coding protein psRNATarget
BT063684.1
ncRNA:21   ACCGUUCAAGUGCUGGUAUAA   1
  ||*|||||||||||||||=||
targets:1301   UGCCAAGUUCACGACCAUGUU   1321

2.5 Zea mays full-length cDNA clone ZM_BFc0094N19 mRNA, complete cds NA coding protein psRNATarget