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BaseInfo

ncRNA ID novel_zma_miR12422
Species Zea mays
Class miRNA
Genome position Chr10:148675630-148675732 [+]
Reference genome RefGen_v4
Source SRR5105961
Length 24
Mature sequence(if miRNA) 1 - AACUUCCUACGGUCGGCUCUAGGA - 24
Stem-loop(if miRNA) --         C   CG C  -          GU              AAAU
  AACUUCCUA GGU  G UC UAGGAAGUUA  UAACUUCCUAGAGU    G
  ||||||||| |||  | || ||||||||||  ||||||||||||||
  UUGAAGGAU UCA  U AG AUCCUUCAAU  AUUGAAGGAUCUCA    U
UA         C   UU C  C          GC              AACA
Stem-loop sequence AACUUCCUACGGUCGGCUCUAGGAAGUUAGUUAACUUCCUAGAGUAAAUGUACAAACUCUAGGAAGUUACGUAACUUCCUACGACUUUACUCUAGGAAGUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:24   AGGAUCUCGGCUGGCAUCCUUCAA   1
  |||||||||*|=||||||||||||
targets:1063   UCCUAGAGCAGGCCGUAGGAAGUU   1086

2.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget