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BaseInfo

ncRNA ID	novel_zma_miR12421
Species	Zea mays
Class	miRNA
Genome position	Chr10:126682774-126682852 [+]
Reference genome	RefGen_v4
Source	SRR1997865
Length	22
Mature sequence(if miRNA)	1 - UGGUGGUUCACCGGACAGCUAC - 22
Stem-loop(if miRNA)	--UG U   U          -    U    G         G     G GGU CACCGGACAG CUAC GUGC CUGUCCGGU U     | ||| |||||||||| |||| |||| |||||||||     C CCG GUGGCCUGUC GAUG CACG GACAGGCCA G UAUA -   C          A    U    -         C
Stem-loop sequence	UGGUGGUUCACCGGACAGCUACUGUGCGCUGUCCGGUGUGCACCGGACAGGCACUGUAGACUGUCCGGUGCGCCCAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ065164.1	ncRNA:22   CAUCGACAGGCCACUUGGUGGU   1   *|*||||*=||||||||||||| targets:5   AUCGCUGCUCGGUGAACCACCA   26 Target Full Sequence	2.0	TSA: Zea mays contig00796, mRNA sequence	NA	coding protein	psRNATarget
NM_001147404.1	ncRNA:22   CAUCGACAGGCCACUUGGUGGU   1   *|*||||*=||||||||||||| targets:1750   AUCGCUGCUCGGUGAACCACCA   1771 Target Full Sequence	2.0	Zea mays uncharacterized LOC100272952 (LOC100272952), mRNA	NA	coding protein	psRNATarget
BT039854.1	ncRNA:22   CAUCGACAGGCCACUUGGUGGU   1   *|*||||*=||||||||||||| targets:1750   AUCGCUGCUCGGUGAACCACCA   1771 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0047C10 mRNA, complete cds	NA	coding protein	psRNATarget
EU943187.1	ncRNA:22   CAUCGACAGGCCACUUGGUGGU   1   *|*||||*=||||||||||||| targets:1778   AUCGCUGCUCGGUGAACCACCA   1799 Target Full Sequence	2.0	Zea mays clone 1582106 mRNA sequence	NA	coding protein	psRNATarget
BT066461.2	ncRNA:22   CAUCGACAGGCCACUUGGUGGU   1   ****||||||||||*||||||| targets:819   AACACUGUCCGGUGCACCACCA   840 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget