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BaseInfo

ncRNA ID	osa-miRf10839-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - CCUGUGACGUUGGUGAAGGUG - NA
Stem-loop(if miRNA)	G   -    C  G     G      A       -------AUUG  ---  U   AAGGACGUUGAGAAACUC CU CGA GCCU CA CAGCG CACAGG GGAGGCC           CA   GC GUC                  G || ||| |||| || ||||| |||||| |||||||           ||   || ||| GA GCU UGGA GU GUUGC GUGUCC CUUCCGG           CU   GA GCG                  C   G   G    A  G     A      C       CGGGCAAACAA  GGG  -   AGGGGAAGGACGGGUUCA
Stem-loop sequence	CUGCGAGCCUCCAGCAGCGGCACAGGAGGAGGCCAUUGCAGCUGUCAAGGACGUUGAGAAACUCGCACUUGGGCAGGAAGGGGAGCGAGGGGUCAACAAACGGGCGGCCUUCCCCUGUGACGUUGGUGAAGGUGUCGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015783032.1	ncRNA:21   GUGGAAGUGGUUGCAGUGUCC   1   ||||||||||||||||||||| targets:465   CACCUUCACCAACGUCACAGG   485 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4337965 (LOC4337965), mRNA	uncharacterized LOC4337965(LOC4337965)	coding protein	psRNATarget
XM_015783341.1	ncRNA:21   GUGGAAGUGGUUGCAGUGUCC   1   ||||||||||||||||||||| targets:335   CACCUUCACCAACGUCACAGG   355 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group F-box protein At5g07610 (LOC4337966), transcript variant X1, mRNA	F-box protein At5g07610(LOC4337966)	coding protein	psRNATarget
AK064652.1	ncRNA:21   GUGGAAGUGGUUGCAGUGUCC   1   ||||||||||||||||||||| targets:342   CACCUUCACCAACGUCACAGG   362 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-114-E10, full insert sequence	NA	coding protein	psRNATarget
XM_015783342.1	ncRNA:21   GUGGAAGUGGUUGCAGUGUCC   1   ||||||||||||||||||||| targets:335   CACCUUCACCAACGUCACAGG   355 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group F-box protein At5g07610 (LOC4337966), transcript variant X2, mRNA	F-box protein At5g07610(LOC4337966)	coding protein	psRNATarget
XM_015787751.1	ncRNA:21   GUGGAAGUGGUUGCAGUGUCC   1   |*|||||=||||||||||*|| targets:280   CUCCUUCGCCAACGUCACCGG   300 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein DETOXIFICATION 16 (LOC4342011), transcript variant X5, mRNA	protein DETOXIFICATION 16(LOC4342011)	coding protein	psRNATarget
AK066647.1	ncRNA:21   GUGGAAGUGGUUGCAGUGUCC   1   |*|||||=||||||||||*|| targets:272   CUCCUUCGCCAACGUCACCGG   292 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013074A05, full insert sequence	NA	coding protein	psRNATarget