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BaseInfo

ncRNA ID	novel_zma_miR12412
Species	Zea mays
Class	miRNA
Genome position	Chr9:1232494-1232542 [-]
Reference genome	RefGen_v4
Source	SRR5105961
Length	21
Mature sequence(if miRNA)	29 - AGUGCAGCGGACAGUCCGGUG - 49
Stem-loop(if miRNA)	--A     G           G  C    GUGCA CGGACAGUCCG UG C    ||||| ||||||||||| || A    CACGU GCCUGUCAGGC GC C GAC     G           G  C
Stem-loop sequence	AGUGCAGCGGACAGUCCGGUGCCACCCGGCGGACUGUCCGGUGCACCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ071967.1	ncRNA:21   GUGGCCUGACAGGCGACGUGA   1   ||||||||||||||*|||||* targets:56   CACCGGACUGUCCGGUGCACC   76 Target Full Sequence	2.5	TSA: Zea mays contig07604, mRNA sequence	NA	coding protein	psRNATarget
EZ092215.1	ncRNA:21   GUGGCCUGACAGGCGACGUGA   1   ||||||||||||||*|||||* targets:30   CACCGGACUGUCCGGUGCACC   50 Target Full Sequence	2.5	TSA: Zea mays contig27864, mRNA sequence	NA	coding protein	psRNATarget
BT042818.1	ncRNA:21   GUGGCCUGACAGGCGACGUGA   1   ||||||||||||||*|||||* targets:838   CACCGGACUGUCCGGUGCACC   858 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0047A15 mRNA, complete cds	NA	coding protein	psRNATarget
EU970212.1	ncRNA:21   GUGGCCUGACAGGCGACGUGA   1   ||||||||||||||*|||||* targets:407   CACCGGACUGUCCGGUGCACC   427 Target Full Sequence	2.5	Zea mays clone 342257 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT016820.1	ncRNA:21   GUGGCCUGACAGGCGACGUGA   1   ||||||||||||||*|||||* targets:191   CACCGGACUGUCCGGUGCACA   211 Target Full Sequence	2.5	Zea mays clone Contig653 mRNA sequence	NA	coding protein	psRNATarget
BT060603.1	ncRNA:21   GUGGCCUGACAGGCGACGUGA   1   ||||||||||||||*|||||* targets:1552   CACCGGACUGUCCGGUGCACC   1572 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0021N16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152406.1	ncRNA:21   GUGGCCUGACAGGCGACGUGA   1   ||||||||||||||*|||||* targets:1567   CACCGGACUGUCCGGUGCACC   1587 Target Full Sequence	2.5	Zea mays uncharacterized LOC100279393 (LOC100279393), mRNA	NA	coding protein	psRNATarget
BT054171.1	ncRNA:21   GUGGCCUGACAGGCGACGUGA   1   ||||||||||||||*|||||* targets:1567   CACCGGACUGUCCGGUGCACC   1587 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0148C07 mRNA, complete cds	NA	coding protein	psRNATarget
EU943181.1	ncRNA:21   GUGGCCUGACAGGCGACGUGA   1   ||||||||||||||*|||||* targets:938   CACCGGACUGUCCGGUGCACC   958 Target Full Sequence	2.5	Zea mays clone 1580698 mRNA sequence	NA	coding protein	psRNATarget