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BaseInfo

ncRNA ID	novel_zma_miR12409
Species	Zea mays
Class	miRNA
Genome position	Chr1:221497103-221497154 [+]
Reference genome	RefGen_v4
Source	SRR5105961
Length	21
Mature sequence(if miRNA)	1 - AUCUGAGUUUGUGUUUGGUUG - 21
Stem-loop(if miRNA)	--AUC  -              U  CU      UG AGUUUGUGUUUGGU GC  G      || |||||||||||||| ||      AC UCAGACGCGAACUA UG  C CACAU  G              -  CA
Stem-loop sequence	AUCUGAGUUUGUGUUUGGUUGCCUGCACGUAUCAAGCGCAGACUGCAUACAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI406404.1	ncRNA:21   GUUGGUUUGUGUUUGAGUCUA   1   ||||||||||||||||||||| targets:119   CAACCAAACACAAACUCAGAU   139 Target Full Sequence	0.0	Sequence 4529 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238534.1	ncRNA:21   GUUGGUUUGUGUUUGAGUCUA   1   ||||||||||||||||||||| targets:119   CAACCAAACACAAACUCAGAU   139 Target Full Sequence	0.0	Sequence 4529 from Patent EP2985353	NA	coding protein	psRNATarget
JB166865.1	ncRNA:21   GUUGGUUUGUGUUUGAGUCUA   1   ||||||||||||||||||||| targets:119   CAACCAAACACAAACUCAGAU   139 Target Full Sequence	0.0	Sequence 4529 from Patent EP2559767	NA	coding protein	psRNATarget
EU940707.1	ncRNA:21   GUUGGUUUGUGUUUGAGUCUA   1   =||||||||||||||||*||* targets:748   UAACCAAACACAAACUCCGAG   768 Target Full Sequence	2.5	Zea mays clone 1000501 mRNA sequence	NA	coding protein	psRNATarget
XM_008671662.2	ncRNA:21   GUUGGUUUGUGUUUGAGUCUA   1   |=|||||*|||||||||*||| targets:158   CGACCAAUCACAAACUCCGAU   178 Target Full Sequence	2.5	PREDICTED: Zea mays BTB/POZ domain and ankyrin repeat-containing protein NH5.1 (LOC103647110), mRNA	NA	coding protein	psRNATarget