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BaseInfo

ncRNA ID	novel_zma_miR12390
Species	Zea mays
Class	miRNA
Genome position	Chr8:155950309-155950380 [-]
Reference genome	RefGen_v4
Source	SRR5105961
Length	21
Mature sequence(if miRNA)	52 - AGAUUGGAGGGGCUAGAAUCC - 72
Stem-loop(if miRNA)	--A           -         A          A    GAUUGGAGGGG CUAGAAUCC CUUCUUAUUU A    ||||||||||| ||||||||| |||||||||| A    CUAACCUCCCC GAUCUUAGG GAAGAAUAAG U CCG           A         G          U
Stem-loop sequence	AGAUUGGAGGGGCUAGAAUCCACUUCUUAUUUAAAUUGAAUAAGAAGGGGAUUCUAGACCCCUCCAAUCGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ074100.1	ncRNA:21   CCUAAGAUCGGGGAGGUUAGA   1   ||||||||||||||||||||* targets:212   GGAUUCUAGCCCCUCCAAUCC   232 Target Full Sequence	1.0	TSA: Zea mays contig09737, mRNA sequence	NA	coding protein	psRNATarget
XM_020539411.1	ncRNA:21   CCUAAGAUCGGGGAGGUUAGA   1   |||||=||||||||||||||* targets:3494   GGAUUUUAGCCCCUCCAAUCC   3514 Target Full Sequence	2.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:21   CCUAAGAUCGGGGAGGUUAGA   1   |||||=||||||||||||||* targets:3529   GGAUUUUAGCCCCUCCAAUCC   3549 Target Full Sequence	2.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EU943746.1	ncRNA:21   CCUAAGAUCGGGGAGGUUAGA   1   |*||||||||||||||||||| targets:209   GAAUUCUAGCCCCUCCAAUCU   229 Target Full Sequence	0.0	Zea mays clone 1684276 mRNA sequence	NA	coding protein	psRNATarget
EU958313.1	ncRNA:21   CCUAAGAUCGGGGAGGUUAGA   1   |*||||||||||||||||||| targets:950   GAAUUCUAGCCCCUCCAAUCU   970 Target Full Sequence	0.0	Zea mays clone 1684888 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020543912.1	ncRNA:21   CCUAAGAUCGGGGAGGUUAGA   1   |||||*||||||||||||||* targets:4121   GGAUUAUAGCCCCUCCAAUCC   4141 Target Full Sequence	2.0	PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA	NA	coding protein	psRNATarget
XM_008658134.2	ncRNA:21   CCUAAGAUCGGGGAGGUUAGA   1   *||||=||||||*|||||||| targets:1812   AGAUUUUAGCCCAUCCAAUCU   1832 Target Full Sequence	2.5	PREDICTED: Zea mays protein G1-like7 (LOC103635755), mRNA	NA	coding protein	psRNATarget
EU959971.1	ncRNA:21   CCUAAGAUCGGGGAGGUUAGA   1   *|||*|||||||||||*|||| targets:80   CGAUCCUAGCCCCUCCCAUCU   100 Target Full Sequence	2.5	Zea mays clone 220915 electron transporter/ thiol-disulfide exchange intermediate mRNA, complete cds	NA	coding protein	psRNATarget
NM_001155101.1	ncRNA:21   CCUAAGAUCGGGGAGGUUAGA   1   *|||*|||||||||||*|||| targets:80   CGAUCCUAGCCCCUCCCAUCU   100 Target Full Sequence	2.5	Zea mays electron transporter/ thiol-disulfide exchange intermediate (LOC100282189), mRNA	NA	coding protein	psRNATarget