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BaseInfo

ncRNA ID	osa-miRf10835-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GAGGAGACCGGCGCUGAGUGA - NA
Stem-loop(if miRNA)	-     CA   A  A        UU  G  G  CCGU   AC   UUGAUUU      CU    --UU   G   UG UUCAUC GUCAU  AGC CC GUUUCCUC  GC AG AC    CUG  CAG       GGAGGU  GAGG    GCG AUC  G |||||| |||||  ||| || ||||||||  || || ||    |||  |||       ||||||  ||||    ||| ||| AGGUGG CAGUG  UCG GG CAGAGGAG  CG UU UG    GAC  GUC       CCUCCA  CUCC    UGC UAG  U       U     AG   C  C        --  G  G  ---U   GA   -------      -U    CGGU   -   UC
Stem-loop sequence	UUCAUCGUCAUCAAGCACCAGUUUCCUCUUGCGAGGACCCGUCUGACCAGUUGAUUUGGAGGUCUGAGGUUGCGGAUCUGGUCUGAUCGUUGGCCCUCUACCUCCCUGAGCAGUGUGUUGGCGAGGAGACCGGCGCUGAGUGACUGGUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015787315.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   ||||||||||||||||||||| targets:155   UCACUCAGCGCCGGUCUCCUC   175 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group proline-rich proteoglycan 2-like (LOC107281375), transcript variant X1, mRNA	proline-rich proteoglycan 2-like(LOC107281375)	coding protein	psRNATarget
XM_015787316.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   ||||||||||||||||||||| targets:155   UCACUCAGCGCCGGUCUCCUC   175 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group proline-rich proteoglycan 2-like (LOC107281375), transcript variant X2, mRNA	proline-rich proteoglycan 2-like(LOC107281375)	coding protein	psRNATarget
XM_015793741.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   ||||||||||||||||||||| targets:122   UCACUCAGCGCCGGUCUCCUC   142 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group neuromodulin-like (LOC107281910), mRNA	neuromodulin-like(LOC107281910)	coding protein	psRNATarget
XM_015779293.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   ||||||||||||||||*|||| targets:387   UCACUCAGCGCCGGUCGCCUC   407 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280621 (LOC107280621), mRNA	uncharacterized LOC107280621(LOC107280621)	coding protein	psRNATarget
AK101516.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   ||||*||*||||||||||||| targets:1522   UCACGCAUCGCCGGUCUCCUC   1542 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J033046G03, full insert sequence	NA	coding protein	psRNATarget
AK065356.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   **|||||*||||||||||||| targets:75   CGACUCACCGCCGGUCUCCUC   95 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013010K21, full insert sequence	NA	coding protein	psRNATarget
AK073173.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   **|||||*||||||||||||| targets:39   CGACUCACCGCCGGUCUCCUC   59 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J033023N06, full insert sequence	NA	coding protein	psRNATarget
XM_015762618.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   **=|||*|||||||||||||| targets:2155   GGGCUCCGCGCCGGUCUCCUC   2175 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group receptor-like protein kinase HSL1 (LOC4326546), mRNA	receptor-like protein kinase HSL1(LOC4326546)	coding protein	psRNATarget
AK120741.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   **=|||*|||||||||||||| targets:2021   GGGCUCCGCGCCGGUCUCCUC   2041 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023003P18, full insert sequence	NA	coding protein	psRNATarget
AK119360.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   **=|||*|||||||||||||| targets:2023   GGGCUCCGCGCCGGUCUCCUC   2043 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:001-131-G06, full insert sequence	NA	coding protein	psRNATarget
XM_015759056.1	ncRNA:21   AGUGAGUCGCGGCCAGAGGAG   1   **|=||=*||||||||||||| targets:106   CGAUUCGCCGCCGGUCUCCUC   126 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group probable apyrase 7 (LOC4348384), mRNA	probable apyrase 7(LOC4348384)	coding protein	psRNATarget