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BaseInfo

ncRNA ID	novel_zma_miR12379
Species	Zea mays
Class	miRNA
Genome position	Chr8:110743198-110743268 [+]
Reference genome	RefGen_v4
Source	SRR5105961
Length	24
Mature sequence(if miRNA)	1 - GUUGAGACACUCGGCAAAGAGCCU - 24
Stem-loop(if miRNA)	--G                  A     ACA     A    UUGAGACACUCGGCAAAG GCCUG   UGGGG C    |||||||||||||||||| |||||   ||||| C    AACUCUGUGAGCCGUUUU CGGGC   GUCCC C GUA                  G     --G     U
Stem-loop sequence	GUUGAGACACUCGGCAAAGAGCCUGACAUGGGGACCCUCCCUGGCGGGCGUUUUGCCGAGUGUCUCAAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI406041.1	ncRNA:24   UCCGA-GAAACGGCUCACAGAGUUG   1   |*|||-||||||||||||||||||* targets:138   AAGCUACUUUGCCGAGUGUCUCAAG   162 Target Full Sequence	3.0	Sequence 4166 from Patent EP2074227	NA	coding protein	psRNATarget
JB166502.1	ncRNA:24   UCCGA-GAAACGGCUCACAGAGUUG   1   |*|||-||||||||||||||||||* targets:138   AAGCUACUUUGCCGAGUGUCUCAAG   162 Target Full Sequence	3.0	Sequence 4166 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238171.1	ncRNA:24   UCCGA-GAAACGGCUCACAGAGUUG   1   |*|||-||||||||||||||||||* targets:138   AAGCUACUUUGCCGAGUGUCUCAAG   162 Target Full Sequence	3.0	Sequence 4166 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008645204.2	ncRNA:24   UCCGAGAAACGGCUCACAGAGUUG   1   =***||||||=||||||||||||* targets:3105   GUCAUCUUUGUCGAGUGUCUCAAA   3128 Target Full Sequence	2.0	PREDICTED: Zea mays putative protein of unknown function (DUF640) domain family protein (LOC100278742), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020553261.1	ncRNA:24   UCCGAGAAACGGCUCACAGAGUUG   1   =***||||||=||||||||||||* targets:3112   GUCAUCUUUGUCGAGUGUCUCAAA   3135 Target Full Sequence	2.0	PREDICTED: Zea mays putative protein of unknown function (DUF640) domain family protein (LOC100278742), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008645203.2	ncRNA:24   UCCGAGAAACGGCUCACAGAGUUG   1   =***||||||=||||||||||||* targets:3173   GUCAUCUUUGUCGAGUGUCUCAAA   3196 Target Full Sequence	2.0	PREDICTED: Zea mays putative protein of unknown function (DUF640) domain family protein (LOC100278742), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666498.2	ncRNA:24   UCCGAGAAACGGCUCACAGAGUUG   1   =||=*|||||*|||||||*||||| targets:1015   GGGUGCUUUGGCGAGUGUAUCAAC   1038 Target Full Sequence	2.5	PREDICTED: Zea mays putative wall-associated receptor kinase-like 16 (LOC103643337), mRNA	NA	coding protein	psRNATarget