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BaseInfo

ncRNA ID	novel_zma_miR12378
Species	Zea mays
Class	miRNA
Genome position	Chr8:97429075-97429137 [+]
Reference genome	RefGen_v4
Source	SRR5105961
Length	21
Mature sequence(if miRNA)	1 - ACUGGAGGGGAUUGGAGGGGC - 21
Stem-loop(if miRNA)	--   G             GG     UAAGG   ACU GAGGGGAUUGGAG  GCUAA     A   ||| |||||||||||||  |||||     G   UGG UUCCCCUAAUCUC  CGAUU     G UU   A             UA     UUAGG
Stem-loop sequence	ACUGGAGGGGAUUGGAGGGGCUAAUAAGGAGGGGAUUUUAGCAUCUCUAAUCCCCUUAGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539411.1	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   ||||||||||||||||||=|| targets:3502   GCCCCUCCAAUCCCCUCCGGU   3522 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   ||||||||||||||||||=|| targets:3537   GCCCCUCCAAUCCCCUCCGGU   3557 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008654495.2	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   ||||||=|||||||||||=|| targets:1115   GCCCCUUCAAUCCCCUCCGGU   1135 Target Full Sequence	2.5	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
XM_008667867.1	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   *|||||||||||||||||=|| targets:1033   ACCCCUCCAAUCCCCUCCGGU   1053 Target Full Sequence	1.5	PREDICTED: Zea mays 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (LOC103644703), mRNA	NA	coding protein	psRNATarget
BT065170.1	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   *|||||||||||||||||=|* targets:686   UCCCCUCCAAUCCCCUCCGGG   706 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0017F16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546477.1	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   |||||*=|||||||||||||| targets:10   GCCCCCUCAAUCCCCUCCAGU   30 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103638694 (LOC103638694), mRNA	NA	coding protein	psRNATarget
XM_008670893.2	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   *|||||||||||||||||=|* targets:1566   UCCCCUCCAAUCCCCUCCGGG   1586 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008670890.2	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   *|||||||||||||||||=|* targets:1586   UCCCCUCCAAUCCCCUCCGGG   1606 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008670892.2	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   *|||||||||||||||||=|* targets:1610   UCCCCUCCAAUCCCCUCCGGG   1630 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008670891.2	ncRNA:21   CGGGGAGGUUAGGGGAGGUCA   1   *|||||||||||||||||=|* targets:1643   UCCCCUCCAAUCCCCUCCGGG   1663 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X2, mRNA	NA	coding protein	psRNATarget