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BaseInfo

ncRNA ID novel_zma_miR12375
Species Zea mays
Class miRNA
Genome position Chr7:49354394-49354490 [+]
Reference genome RefGen_v4
Source SRR5105961
Length 21
Mature sequence(if miRNA) 1 - UAACAUUAGCACUGGCGGGCU - 21
Stem-loop(if miRNA) --                                     -AC     AU
  UAACAUUAGCACUGGCGGGCUGCUAAAGAAAACCGCC   UGAAA  C
  |||||||||||||||||||||||||||||||||||||   |||||
  AUUGUAAUCGUGACCGUCCGACGAUUUCUUUUGGUGG   ACUUU  A
UU                                     ACA     GU
Stem-loop sequence UAACAUUAGCACUGGCGGGCUGCUAAAGAAAACCGCCACUGAAAAUCAUGUUUCAACAGGUGGUUUUCUUUAGCAGCCUGCCAGUGCUAAUGUUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU962216.1
ncRNA:21   UCGGGCGGUCACGAUUACAAU   1
  *||||||||||||||*||||*
targets:995   CGCCCGCCAGUGCUAUUGUUU   1015

2.5 Zea mays clone 241022 mRNA sequence NA coding protein psRNATarget
XM_008646258.2
ncRNA:21   UCGGGCGGUCACGAUUACAAU   1
  *||||||||||||||*||||*
targets:1116   CGCCCGCCAGUGCUAUUGUUU   1136

2.5 PREDICTED: Zea mays zinc finger protein 1 (LOC103625861), mRNA NA coding protein psRNATarget